Pre_GI: BLASTP Hits

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Query: NC_015224:889536:902624 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 902624, End: 903517, Length: 894

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:334467:342718342718343605888Escherichia coli 536, complete genomeputative LysR-family transcriptional regulator1e-72273
NC_012668:83641:106939106939107835897Vibrio cholerae MJ-1236 chromosome 1, complete sequencechromosome replication initiation inhibitor protein1e-69263
NC_009937:4350132:435642343564234357316894Azorhizobium caulinodans ORS 571, complete genometranscriptional regulator2e-39162
NC_008740:1484531:151373115137311514603873Marinobacter aquaeolei VT8, complete genometranscriptional regulator, LysR family2e-37155
NC_003902:3514000:351545935154593516376918Xanthomonas campestris pv. campestris str. ATCC 33913, completechromosome replication initiation inhibitor protein2e-36152
NC_015563:4414854:443300544330054433910906Delftia sp. Cs1-4 chromosome, complete genometranscriptional regulator ArgP5e-36151
NC_015947:1290614:131205113120511312944894Burkholderia sp. JV3 chromosome, complete genomeLysR family transcriptional regulator ArgP1e-35150
NC_010943:1426885:145597214559721456868897Stenotrophomonas maltophilia K279a, complete genomeputative LysR family TRANSCRIPTIONAL REGULATORY PROTEIN3e-35149
NC_010524:933191:943524943524944378855Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family5e-35148
NC_015953:2603526:260352626035262604431906Streptomyces sp. SirexAA-E chromosome, complete genomeLysR family transcriptional regulator5e-35148
NC_009075:15017:431024310243995894Burkholderia pseudomallei 668 chromosome II, complete sequenceTranscriptional regulator7e-35147
NC_012917:2362725:238420523842052385104900Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, ArgP, LysR family4e-33142
NC_010524:1005355:100965410096541010589936Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family4e-33142
NC_007951:1971584:198313919831391984071933Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family5e-33141
NC_010676:2793237:280280828028082803740933Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family3e-32139
NC_009654:3980289:398028939802893981167879Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator6e-32137
NC_015136:2282488:228305222830522283975924Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP2e-30132
NC_015136:2282488:231933023193302320274945Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP8e-30130
NC_010623:72500:763497634977254906Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-28125
NC_012982:2415237:243643924364392437323885Hirschia baltica ATCC 49814, complete genometranscriptional regulator, ArgP, LysR family2e-26120
NC_014550:7560:177491774918633885Arthrobacter arilaitensis Re117, complete genomelysine export transcriptional regulatory protein LysG2e-26119
NC_012803:2195808:223996322399632240838876Micrococcus luteus NCTC 2665, complete genometranscriptional regulator5e-26118
NC_009480:2580429:258042925804292581325897Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative transcriptional regulator, LysR family1e-25117
NC_011894:2503639:250747925074792508060582Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family1e-0757.4
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family5e-0652
NC_004578:4708220:471062747106274711544918Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator MetR6e-0651.6