Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4013825 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4013825, End: 4014268, Length: 444

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010995:4460413:447790244779024478402501Cellvibrio japonicus Ueda107, complete genomeTranscriptional regulator family5e-31132
NC_014217:1352777:136840813684081368872465Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family7e-30129
NC_008687:302450:303258303258303755498Paracoccus denitrificans PD1222 chromosome 2, complete sequencetranscriptional regulator, BadM/Rrf2 family1e-28125
NC_015138:2110149:212304021230402123483444Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeBadM/Rrf2 family transcriptional regulator1e-27122
NC_007645:2294553:233269523326952333102408Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator1e-27121
NC_009952:2752500:275702127570212757491471Dinoroseobacter shibae DFL 12, complete genometranscriptional regulator6e-27119
NC_008752:3684739:368699036869903687433444Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, BadM/Rrf2 family3e-26117
NC_008686:1383891:139007213900721390542471Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, BadM/Rrf2 family9e-25112
NC_014840:205723:237346237346237768423Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, BadM/Rrf2 family3e-23107
NC_003305:693810:712189712189712611423Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein7e-1992.4
NC_003063:1358738:136208513620851362567483Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein9e-1992.4
NC_016582:11878078:119013021190130211901736435Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein6e-1579.3
NC_006582:3949832:395054039505403950968429Bacillus clausii KSM-K16, complete genomehypothetical protein6e-1476.3
NC_021182:1188000:119861611986161199044429Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator1e-1375.5
NC_010516:359310:362087362087362518432Clostridium botulinum B1 str. Okra, complete genomerrf2 family protein1e-1271.6
NC_012912:1053618:108756610875661088012447Dickeya zeae Ech1591, complete genometranscriptional regulator, BadM/Rrf2 family7e-1269.3
NC_012925:191501:192611192611193030420Streptococcus suis P1/7, complete genometranscriptional regulator protein2e-1168.2
NC_014376:6296:150851508515516432Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family3e-1167.4
NC_015737:1976000:200201820020182002458441Clostridium sp. SY8519, complete genomehypothetical protein6e-1166.2
NC_006322:3198829:321768432176843218118435Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-1064.3
NC_019842:484933:507481507481507924444Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-1063.9
NC_020410:495184:510885510885511328444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative HTH-type transcriptional regulator ywnA6e-1063.2
NC_009725:496443:512050512050512493444Bacillus amyloliquefaciens FZB42, complete genomeYwnA15e-1063.2
NC_006510:1014500:103480610348061035216411Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-1062.8
NC_003212:456214:478256478256478723468Listeria innocua Clip11262, complete genomehypothetical protein1e-0962.4
NC_020210:901240:927891927891928301411Geobacillus sp. GHH01, complete genometranscriptional regulator BadM/Rrf2 family4e-0960.5
NC_013891:575746:587430587430587846417Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeRrf2 family transcriptional regulator protein8e-0855.8
NC_012984:3077004:309908130990813099506426Lactobacillus plantarum JDM1, complete genometranscription regulator (putative)1e-0755.5
NC_015578:3561838:357197935719793572464486Treponema primitia ZAS-2 chromosome, complete genomeRRF2 family protein2e-0754.7