Pre_GI: BLASTP Hits

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Query: NC_014169:2407266:2419255 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2419255, End: 2420544, Length: 1290

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014656:1704101:1710723171072317120121290Bifidobacterium longum subsp. longum BBMN68 chromosome, completemale-type abc sugar transport system periplasmic component0884
NC_010816:1735937:1735937173593717372261290Bifidobacterium longum DJO10A, complete genomeMalE-type ABC sugar transport system periplasmic component0874
NC_014828:1905479:1919665191966519209691305Ethanoligenens harbinense YUAN-3 chromosome, complete genomeextracellular solute-binding protein family 14e-62239
NC_014622:5251000:5251227525122752524921266Paenibacillus polymyxa SC2 chromosome, complete genomemultiple sugar-binding transporter multiple sugar-binding protein1e-22107
NC_014622:653599:6574276574276587221296Paenibacillus polymyxa SC2 chromosome, complete genomemultiple sugar-binding transporter multiple sugar-binding protein3e-22106
NC_013656:2317224:2320566232056623218101245Lactococcus lactis subsp. lactis KF147, complete genomesugar ABC transporter sugar-binding protein1e-21104
NC_014483:4891100:4892084489208448933491266Paenibacillus polymyxa E681 chromosome, complete genomeABC-type sugar transport system, periplasmic component2e-21103
NC_017138:2293576:2294922229492222961811260Bacillus megaterium WSH-002 chromosome, complete genomesugar ABC superfamily ATP binding cassette transporter, binding protein5e-21102
NC_016641:2225779:2229650222965022310351386Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein8e-21102
NC_014483:562594:5665565665565678511296Paenibacillus polymyxa E681 chromosome, complete genomeABC-type sugar transport system, periplasmic component9e-2098.6
NC_011899:1021672:1024430102443010257041275Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 13e-1996.7
NC_006270:1119000:1145081114508111463341254Bacillus licheniformis ATCC 14580, complete genomemultiple sugar-binding protein MsmE3e-1893.2
NC_006322:1119471:1145935114593511471881254Bacillus licheniformis ATCC 14580, complete genomeMsmE3e-1893.2
NC_012914:4238142:4261099426109942624451347Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 19e-1891.7
NC_020995:477765:5219055219055232121308Enterococcus casseliflavus EC20, complete genomehypothetical protein1e-1687.8
NC_014169:1909482:1922288192228819235621275Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 1 extracellular solute-binding protein6e-1685.9
NC_014364:815346:8153468153468166261281Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-1584.3
NC_018720:47984:7697776977782301254Bifidobacterium asteroides PRL2011 chromosome, complete genomeABC transporter, extracellular substrate binding protein, probably xylobiose porter3e-1583.2
NC_015152:272500:2726852726852739591275Spirochaeta sp. Buddy chromosome, complete genomeextracellular solute-binding protein family 12e-1480.5
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein8e-1478.6
NC_016641:4653889:4671448467144846727221275Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1274.3
NC_014915:1909275:1921556192155619229171362Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 12e-1274.3
NC_013411:2767400:2781619278161927829831365Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 12e-1274.3
NC_015737:1931541:1933294193329419346311338Clostridium sp. SY8519, complete genomesugar-binding periplasmic protein/domains2e-1274.3
NC_003030:3871658:3872569387256938739601392Clostridium acetobutylicum ATCC 824, complete genomeABC-type sugar transport system, periplasmic sugar-binding component2e-1274.3
NC_013526:835117:8442878442878457741488Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 14e-1273.2
NC_007435:1446916:1485572148557214868131242Burkholderia pseudomallei 1710b chromosome II, complete sequenceABC transporter, substrate-binding protein6e-1272.4
NC_009078:2718741:2757397275739727585961200Burkholderia pseudomallei 1106a chromosome II, complete sequenceABC transporter, carbohydrate uptake transporter-1 (CUT1) family, periplasmic carbohydrate-binding protein6e-1272.4
NC_008261:1249595:1270941127094112722001260Clostridium perfringens ATCC 13124, complete genomesugar ABC transporter, sugar-binding protein6e-1272.4
NC_014364:2562281:2583685258368525849861302Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-1170.9
NC_011830:2811441:2828725282872528300291305Desulfitobacterium hafniense DCB-2, complete genomeextracellular solute-binding protein family 15e-1169.3
NC_015690:7334786:7334786733478673361141329Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-1169.3
NC_007907:1732500:1746304174630417476081305Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-1168.6
NC_014831:2258398:2263861226386122652011341Thermaerobacter marianensis DSM 12885 chromosome, complete genomeextracellular solute-binding protein family 13e-1067
NC_016616:3585435:3607849360784936092131365Dechlorosoma suillum PS chromosome, complete genomesugar ABC transporter periplasmic protein3e-1067
NC_014364:3500041:3506794350679435080321239Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 16e-1065.9
NC_008010:321561:3322443322443335061263Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceextracellular solute-binding protein, family 18e-1065.5
NC_016641:4653889:4669035466903546702971263Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0965.1
NC_014364:1263427:1278910127891012802081299Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 13e-0963.5
NC_010175:448020:4604304604304617761347Chloroflexus aurantiacus J-10-fl, complete genomeextracellular solute-binding protein family 13e-0963.5
NC_012032:448161:4605724605724619181347Chloroflexus sp. Y-400-fl, complete genomeextracellular solute-binding protein family 13e-0963.5
NC_019970:929666:9492049492049505231320Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type sugar transport system, periplasmic component4e-0963.2
NC_003888:6853107:6853107685310768544291323Streptomyces coelicolor A3(2), complete genomeprobable sugar transport system sugar-binding lipoprotein SC2H413c5e-0962.8
NC_014656:1365673:1383889138388913852141326Bifidobacterium longum subsp. longum BBMN68 chromosome, completesolute binding protein of abc transporter system9e-0962
NC_020291:1045058:1051597105159710528561260Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeextracellular solute-binding protein, family 18e-0962
NC_010001:4168817:4172661417266141740161356Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 11e-0861.6
NC_014720:154111:1562391562391575611323Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 12e-0861.2
NC_020207:2575808:2575808257580825770911284Enterococcus faecium NRRL B-2354, complete genomeABC-type sugar transport system, periplasmic binding protein YcjN2e-0860.5
NC_014829:4088494:4107683410768341090171335Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 16e-0859.3
NC_008618:1206157:1210115121011512114821368Bifidobacterium adolescentis ATCC 15703, complete genomepossible solute binding protein of ABC transporter5e-0859.3
NC_013172:3093467:3101736310173631030161281Brachybacterium faecium DSM 4810, complete genomeABC-type sugar transport system, periplasmic component7e-0858.9
NC_012669:1011473:1017836101783610192361401Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 18e-0858.5
NC_019978:224619:2246192246192259681350Halobacteroides halobius DSM 5150, complete genomeABC-type sugar transport system, periplasmic component3e-0757
NC_011898:3772899:3791754379175437930851332Clostridium cellulolyticum H10, complete genomeextracellular solute-binding protein family 13e-0757
NC_015588:1847500:1861534186153418627991266Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 14e-0756.2
NC_013526:105195:1229431229431243491407Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 15e-0756.2
NC_014364:815346:8385568385568398301275Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 16e-0755.8
NC_015677:3179910:3192885319288531940661182Ramlibacter tataouinensis TTB310 chromosome, complete genomesugar ABC transporter periplasmic protein6e-0755.8
NC_016628:537137:5466405466405479141275Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesugar transport system sugar-binding lipoprotein6e-0755.8
NC_013521:302574:3200153200153212951281Sanguibacter keddieii DSM 10542, complete genomecarbohydrate-binding protein5e-0755.8
NC_016582:8711199:8715519871551987168381320Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative extracellular solute-binding protein9e-0755.1
NC_014246:288847:2965932965932980051413Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter ATP-binding protein2e-0654.3
NC_020291:270234:2875132875132888201308Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family2e-0654.3
NC_009328:1867971:1885183188518318865051323Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter sugar-binding protein2e-0653.9
NC_013406:303218:3367583367583380501293Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0653.9
NC_019897:3810000:3818655381865538200731419Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-0653.9
NC_014246:1787154:1798378179837817996131236Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter substrate-binding protein3e-0653.5
NC_015578:298989:3251293251293263971269Treponema primitia ZAS-2 chromosome, complete genomeputative sugar ABC-transporter, sugar-binding protein3e-0653.5
NC_016641:1984206:1986876198687619881261251Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein4e-0652.8
NC_019970:336472:4140204140204153301311Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family5e-0652.8
NC_021182:966839:9705849705849718611278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component5e-0652.8
NC_017080:2095706:2098965209896521014452481Phycisphaera mikurensis NBRC 102666, complete genomeputative ABC transporter substrate binding protein/permease protein6e-0652.4
NC_010524:933191:9517829517829530891308Leptothrix cholodnii SP-6, complete genomeextracellular solute-binding protein family 17e-0652.4
NC_008043:499399:5144205144205156731254Silicibacter sp. TM1040 mega plasmid, complete sequenceextracellular solute-binding protein, family 17e-0652
NC_013093:2633000:2663250266325026645241275Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 19e-0652