Pre_GI: BLASTP Hits

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Query: NC_014169:231210:246353 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 246353, End: 248053, Length: 1701

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:4299287:4308017430801743100172001Rhodococcus opacus B4, complete genomehypothetical protein8e-26119
NC_008390:2643653:2653394265339426557872394Burkholderia cepacia AMMD chromosome 1, complete sequenceTOPRIM domain protein7e-22105
NC_009256:2725836:2727734272773427301272394Burkholderia vietnamiensis G4 chromosome 1, complete sequenceTOPRIM domain-containing protein7e-22105
NC_017249:908500:9152209152209167911572Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-20101
NC_014311:978761:9876869876869891701485Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-20100
NC_015977:3424178:3464864346486434667651902Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-1790.1
NC_017986:1862408:1873624187362418746461023Pseudomonas putida ND6 chromosome, complete genomehypothetical protein8e-1789
NC_015977:442493:450952450952451947996Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-1687.8
NC_010501:4787963:4794595479459547957821188Pseudomonas putida W619, complete genomehypothetical protein1e-1585.1
NC_007434:3973145:4012459401245940140151557Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein3e-1480.5
NC_014215:492855:5039985039985065202523Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein2e-1274.7
NC_013722:1905655:1923594192359419253721779Xanthomonas albilineans, complete genomehypothetical protein3e-1273.9
NC_013757:2046000:2051466205146620536222157Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein4e-1067
NC_014168:994640:1015301101530110168991599Segniliparus rotundus DSM 44985 chromosome, complete genomehypothetical protein9e-0962.4
NC_017214:54558:6312063120643821263Bifidobacterium animalis subsp. lactis BB-12 chromosome, completezinc metalloprotease1e-0862
NC_017215:1361822:1370384137038413716461263Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein1e-0862
NC_012814:1357070:1365578136557813667801203Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-0862
NC_012815:1357003:1365511136551113667131203Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein1e-0862
NC_011835:965977:9744859744859756871203Bifidobacterium animalis subsp. lactis AD011 chromosome, completeATP-dependent serine protease1e-0862
NC_017216:1356930:1365438136543813666401203Bifidobacterium animalis subsp. lactis BLC1, complete genomeAAA domain-containing protein1e-0862
NC_017217:1362573:1371081137108113722831203Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein1e-0862
NC_018750:4311300:4319819431981943209971179Streptomyces venezuelae ATCC 10712, complete genometoprim domain protein3e-0860.5
NC_016026:2082500:2092628209262820943341707Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeprimase family protein4e-0860.1
NC_006569:69939:8294082940847511812Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencehypothetical protein1e-0758.9
NC_015593:2553500:2578299257829925800231725Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeBifunctional DNA primase/polymerase6e-0653.1