Pre_GI: BLASTP Hits

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Query: NC_013929:8106492:8127014 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 8127014, End: 8128036, Length: 1023

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:7979050:7994625799462579956411017Streptomyces avermitilis MA-4680, complete genomeLacI-family transcriptional regulator2e-114412
NC_003888:1751179:1756582175658217576341053Streptomyces coelicolor A3(2), complete genomeLacI family regulator1e-112406
NC_015312:2278566:2309825230982523108591035Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeLacI family transcriptional regulator2e-1376.6
NC_008543:259450:2817792817792828881110Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LacI family1e-1067.8
NC_014666:6940532:6943468694346869446071140Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, LacI family1e-0964.3
NC_015588:475723:494735494735495721987Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, LacI family1e-0963.9
NC_013093:1213908:1238363123836312394151053Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LacI family3e-0860.1
NC_009480:31412:4212442124432091086Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative transcriptional regulator, LacI family7e-0858.5
NC_013192:618936:6445366445366455371002Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, LacI family1e-0758.2
NC_010556:316996:3420593420593430721014Exiguobacterium sibiricum 255-15, complete genometranscriptional regulator, LacI family1e-0757.8
NC_008391:2253188:227498622749862275978993Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LacI family2e-0756.6
NC_006510:1921541:1934130193413019351461017Geobacillus kaustophilus HTA426, complete genometranscriptional regulator involved in degradation (LacI family)4e-0755.8
NC_016114:7252500:7261673726167372627011029Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeLacI family transcriptional regulator6e-0755.5
NC_014306:2518996:2537485253748525385221038Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LacI family7e-0755.1
NC_007103:291000:292765292765293760996Bacillus cereus E33L plasmid pE33L466, complete sequencedegradation activator2e-0653.5
NC_010407:1775227:1781456178145617824931038Clavibacter michiganensis subsp. sepedonicus chromosome, completeLacI family transcriptional regulator4e-0652.8
NC_016027:229180:2354022354022364781077Gluconacetobacter xylinus NBRC 3288, complete genomeLacI family transcriptional regulator1e-0551.2