Pre_GI: BLASTP Hits

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Query: NC_013890:1175931:1179012 Dehalococcoides sp. GT chromosome, complete genome

Start: 1179012, End: 1179941, Length: 930

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:1165760:120316212031621204091930Dehalococcoides sp. CBDB1, complete genomeCRISPR-associated protein Cas13e-180630
NC_007775:723925:734001734001734948948Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas13e-74278
NC_015387:942974:958348958348959319972Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas12e-71269
NC_015170:54000:672306723068177948Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein Cas11e-68259
NC_015676:1663700:166956716695671670478912Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein Cas15e-68258
NC_008609:2518993:252341825234182524341924Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein Cas12e-67256
NC_002939:1505701:152056915205691521489921Geobacter sulfurreducens PCA, complete genomeCRISPR-associated protein Cas11e-67256
NC_014355:1461355:147406814740681474988921Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cas13e-67255
NC_009654:3980289:399837239983723999295924Marinomonas sp. MWYL1, complete genomeCRISPR-associated Cas1 family protein3e-65248
NC_013850:985331:997671997671998588918Klebsiella variicola At-22 chromosome, complete genomeCRISPR-associated protein Cas11e-63243
NC_009800:2889928:289608828960882897005918Escherichia coli HS, complete genomeCRISPR-associated protein Cas11e-62240
NC_000913:2873443:287687728768772877794918Escherichia coli K12, complete genomehypothetical protein1e-62240
AC_000091:2872000:287751128775112878428918Escherichia coli W3110 DNA, complete genomehypothetical protein1e-62240
NC_010473:2963951:296941929694192970336918Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-62240
NC_012759:2757826:276268927626892763606918Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-62240
NC_010468:1029471:104362710436271044544918Escherichia coli ATCC 8739, complete genomeCRISPR-associated protein Cas12e-62239
NC_007643:185135:200286200286201227942Rhodospirillum rubrum ATCC 11170, complete genomeProtein of unknown function DUF482e-62239
NC_013851:759500:762733762733763650918Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein Cas12e-59229
NC_018720:1812000:181462318146231815591969Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein cas13e-59228
NC_015434:2527412:252808625280862529054969Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cas1 family protein3e-58225
NC_011894:5468500:549466054946605495604945Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein Cas19e-57220
NC_015389:481282:494659494659495654996Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cas1 family1e-55217
NC_016109:603829:6141236141236151571035Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein2e-55216
NC_008526:343445:355004355004355951948Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein8e-55214
NC_019673:1988853:203637620363762037350975Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated protein Cas15e-54211
NC_013131:4422000:442842044284204429391972Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein Cas11e-53209
NC_008278:514600:527634527634528626993Frankia alni ACN14a, complete genomehypothetical protein3e-53209
NC_012912:1053618:105361810536181054493876Dickeya zeae Ech1591, complete genomeCRISPR-associated protein Cas15e-53207
NC_014727:798191:817520817520818470951Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein3e-51202
NC_013510:3117837:313604731360473136994948Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas16e-51201
NC_008054:745704:762222762222763172951Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein1e-50200
NC_008529:735233:754399754399755316918Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein1e-50200
NC_002932:1851070:187608918760891876979891Chlorobium tepidum TLS, complete genomehypothetical protein3e-50198
NC_010610:795975:813856813856814797942Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-49196
NC_014210:1588426:159359515935951594578984Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein Cas14e-48192
NC_012590:977920:991606991606992544939Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein2e-46186
NC_015436:1287873:130082613008261301671846Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated protein, Cas1 family2e-46186
NC_007164:775000:777470777470778411942Corynebacterium jeikeium K411, complete genomehypothetical protein1e-45184
NC_006361:4574536:4584578458457845858911314Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-45183
NC_007333:1743890:182937618293761830374999Thermobifida fusca YX, complete genomeProtein of unknown function DUF481e-42174
NC_008340:1075500:107991810799181080814897Alkalilimnicola ehrlichei MLHE-1, complete genomeCRISPR-associated protein Cas12e-35150
NC_015737:2146953:215991621599162160482567Clostridium sp. SY8519, complete genomehypothetical protein2e-33142
NC_016932:1791868:179379217937921794745954Corynebacterium pseudotuberculosis 316 chromosome, complete genomeCRISPR-associated protein1e-29130
NC_016786:2235731:224900022490002249959960Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein1e-28127
NC_016782:2235000:224840122484012249360960Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein1e-28127
NC_002935:2292835:230472923047292305688960Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein1e-28127
NC_014926:1483974:149505014950501495946897Thermovibrio ammonificans HB-1 chromosome, complete genomeCRISPR-associated protein Cas14e-0755.8