Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5148677 Citrobacter rodentium ICC168, complete genome

Start: 5148677, End: 5149078, Length: 402

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:3941974:394463339446333945034402Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-63241
NC_011149:1077589:108707410870741087475402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA1e-63241
NC_011149:4677412:467834246783424678743402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA1e-63241
NC_011149:1987291:198947519894751989876402Salmonella enterica subsp. enterica serovar Agona str. SL483,ISPsy11, transposase OrfA1e-63241
NC_006905:3942753:394983939498393950240402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein8e-63238
NC_006905:3780000:378839637883963788797402Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein8e-63238
NC_015566:2039431:205615420561542056552399Serratia sp. AS12 chromosome, complete genomeISPsy11, transposase OrfA2e-53207
NC_015567:2039443:205616620561662056564399Serratia sp. AS9 chromosome, complete genomeISPsy11, transposase OrfA2e-53207
NC_020829:1840281:186247118624711862872402Pseudomonas denitrificans ATCC 13867, complete genomeISPsy11, transposase OrfA2e-43173
NC_015424:2462522:247543124754312475829399Aeromonas veronii B565 chromosome, complete genomeIS3 family transposase A4e-40162
NC_007492:2310793:231654123165412316942402Pseudomonas fluorescens PfO-1, complete genomeISPsy11, transposase OrfA9e-38155
NC_014228:3391500:340598934059893406378390Xenorhabdus nematophila ATCC 19061, complete genometransposase3e-37153
NC_015224:610807:610807610807611205399Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,IS1669 hypothetical protein7e-33139
NC_014931:6415940:642900964290096429419411Variovorax paradoxus EPS chromosome, complete genomeISPsy11, transposase OrfA1e-31134
NC_011001:2085986:214095421409542141352399Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transposase7e-28122
NC_013037:2305585:231813523181352318542408Dyadobacter fermentans DSM 18053, complete genometransposase2e-22103
NC_015276:2852010:285267228526722853079408Marinomonas mediterranea MMB-1 chromosome, complete genometransposase4e-2199.8
NC_016599:2119631:212609521260952126520426Owenweeksia hongkongensis DSM 17368 chromosome, complete genomehypothetical protein2e-1787.8
NC_015846:924087:941293941293941922630Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein2e-1580.9