Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3533906 Citrobacter rodentium ICC168, complete genome

Start: 3533906, End: 3534106, Length: 201

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:3245368:324980232498023250482681Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-32137
NC_010067:3056774:305958830595883060268681Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-32137
NC_012731:560199:5865955865955877101116Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-29127
NC_016809:112410:127426127426128367942Haemophilus influenzae 10810, complete genomeexported protein2e-1477.4
NC_018691:2288000:230737623073762308329954Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein5e-1476.3
NC_012560:3698697:369905936990593699991933Azotobacter vinelandii DJ, complete genomehypothetical protein8e-1475.5
NC_021150:3698696:369905836990583699990933Azotobacter vinelandii CA6, complete genomehypothetical protein8e-1475.5
NC_016832:4425330:442571944257194426687969Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,PFL4710 family integrating conjugative element protein6e-1372.8
NC_012125:4536383:453677245367724537740969Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-1372.8
NC_003198:4453457:445384644538464454814969Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-1372.8
NC_009512:3334579:3334579333457933356101032Pseudomonas putida F1, complete genomeprotein of unknown function DUF15279e-1372
NC_010170:1417615:143599414359941436938945Bordetella petrii, complete genomehypothetical protein1e-1272
NC_010501:3671517:367151736715173672494978Pseudomonas putida W619, complete genomeprotein of unknown function DUF15271e-1271.6
NC_010170:1551923:1551923155192315529901068Bordetella petrii, complete genomehypothetical protein2e-1271.2
NC_012214:3303955:331961033196103320581972Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein2e-1270.9
NC_014640:1179382:117938211793821180332951Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-1270.5
NC_008344:49039:757627576276694933Nitrosomonas eutropha C91, complete genomeprotein of unknown function DUF15273e-1270.5
NC_004578:895019:917806917806918744939Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1270.5
NC_015733:2581324:263357326335732634334762Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-1270.5
NC_017986:409899:408925408925409902978Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-1270.1
NC_012691:2614603:267221026722102673142933Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF15274e-1270.1
NC_013421:1744928:176151817615181762453936Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15274e-1270.1
NC_013421:701005:719271719271720239969Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15275e-1269.7
NC_016845:4498097:451960845196084520549942Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-1269.3
NC_010002:4572573:457367545736754574622948Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF15277e-1269.3
NC_010688:2850164:285016428501642851129966Xanthomonas campestris pv. campestris, complete genomehypothetical protein7e-1269.3
NC_007005:1605000:161816316181631619101939Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF15271e-1168.9
NC_006513:1379735:143253314325331433483951Azoarcus sp. EbN1, complete genomehypothetical protein1e-1168.6
NC_018080:5091772:517297451729745173912939Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-1168.2
NC_008463:5313527:534178853417885342726939Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1168.2
NC_009656:4527457:464738946473894648327939Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1168.2
NC_016830:3869572:389110438911043891979876Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-1168.2
NC_009138:1974935:203182120318212032768948Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1167.8
NC_004129:5373886:544211354421135443051939Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-1167.4
NC_015726:2862500:287543428754342876384951Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-1167.4
NC_011662:1017933:103543110354311036375945Thauera sp. MZ1T, complete genomeprotein of unknown function DUF15273e-1167
NC_007086:1224867:125770912577091258647939Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-1167
NC_003902:3666544:368914936891493690087939Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-1167
NC_012912:483390:498388498388499314927Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF15274e-1167
NC_013892:1457500:146359114635911464559969Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-1165.9
NC_014228:3442159:345499734549973455965969Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-1165.9
NC_014532:3596097:359512035951203596100981Halomonas elongata DSM 2581, complete genomehypothetical protein7e-1165.9
NC_007492:3462929:346292934629293463885957Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF15271e-1065.1
NC_012660:2045398:209970920997092100665957Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-1063.5
NC_012779:346998:355672355672356664993Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-1062.4
NC_015379:2417312:243476724347672435720954Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein1e-0962
NC_004547:639726:639726639726640700975Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0961.6
NC_010554:2789722:281047528104752811449975Proteus mirabilis HI4320, complete genomehypothetical protein2e-0961.2
NC_014029:331919:3789463789463799531008Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-0855.8
NC_015566:345084:3468803468803478871008Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein8e-0855.8
NC_015567:346500:3470453470453480521008Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein8e-0855.8
NC_015554:4648919:4672653467265346736661014Alteromonas sp. SN2 chromosome, complete genomehypothetical protein1e-0548.9