Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3332650 Citrobacter rodentium ICC168, complete genome

Start: 3332650, End: 3332997, Length: 348

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:2688747:269603126960312696375345Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-29128
NC_011601:1269500:128838412883841288719336Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1065.5
NC_021066:3769405:377812137781213778471351Raoultella ornithinolytica B6, complete genomeanti-adapter protein IraM2e-1064.7
NC_020181:3585898:360806936080693608428360Enterobacter aerogenes EA1509E, complete genomeputative cytoplasmic protein2e-1064.7
NC_010473:1245284:125114412511441251467324Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-1063.2
AC_000091:1191353:121325712132571213580324Escherichia coli W3110 DNA, complete genomehypothetical protein5e-1063.2
NC_010468:2699000:271436927143692714692324Escherichia coli ATCC 8739, complete genomehypothetical protein5e-1063.2
NC_000913:1188999:121090312109031211226324Escherichia coli K12, complete genomehypothetical protein5e-1063.2
NC_012759:1093764:109962410996241099947324Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-1063.2
NC_016822:1304398:131936313193631319686324Shigella sonnei 53G, complete genomeanti-adapter protein IraM2e-0960.8
NC_013941:1460144:146395314639531464276324Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeanti-adapter protein iraM2e-0960.8
NC_011748:1300863:130672313067231307046324Escherichia coli 55989, complete genomehypothetical protein4e-0960.1
CU928145:1300863:130672313067231307046324Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein associated with lycopene formation4e-0960.1
NC_011415:1273551:127941112794111279734324Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-0960.1
NC_012947:2566754:258221925822192582542324Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-0960.1
NC_012967:1205985:121184512118451212168324Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein4e-0960.1
NC_013361:1634226:163871216387121639035324Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-0960.1
CP002516:2786000:280099028009902801313324Escherichia coli KO11, complete genomehypothetical protein5e-0959.7
AP010958:1339263:134512313451231345446324Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein5e-0959.7
NC_013353:1339263:134512313451231345446324Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-0959.7
NC_016902:2786000:280099028009902801313324Escherichia coli KO11FL chromosome, complete genomehypothetical protein5e-0959.7
NC_013364:1477248:150652515065251506848324Escherichia coli O111:H- str. 11128, complete genomehypothetical protein9e-0958.9
NC_011750:1978801:199203019920301992353324Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-0858.2
NC_011751:1446073:145794214579421458265324Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-0857.8