Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1178383:1201327 Citrobacter rodentium ICC168, complete genome

Start: 1201327, End: 1201782, Length: 456

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1165232:118858611885861189041456Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1curlin minor subunit6e-68255
NC_003197:1207597:123113312311331231588456Salmonella typhimurium LT2, complete genomeminor curlin subunit precursor6e-68255
NC_011080:1209935:123292012329201233375456Salmonella enterica subsp. enterica serovar Newport str. SL254,minor curlin protein CsgB6e-68255
NC_006905:1186895:121121812112181211673456Salmonella enterica subsp. enterica serovar Choleraesuis strminor curlin subunit precursor, nucleator for assembly of adhesive surface organelles6e-68255
NC_017046:1164176:118731911873191187801483Salmonella enterica subsp. enterica serovar Typhimurium str. 798curlin monomer nucleation protein8e-68255
NC_016860:1205282:122879212287921229274483Salmonella enterica subsp. enterica serovar Typhimurium strminor curlin protein CsgB8e-68255
NC_011083:1216500:123548112354811235936456Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,minor curlin protein CsgB2e-67253
NC_003198:1117687:114140911414091141864456Salmonella enterica subsp. enterica serovar Typhi str. CT18,nucleation component of curlin monomers4e-67253
NC_004337:1065609:108011110801111080566456Shigella flexneri 2a str. 301, complete genomeminor curlin subunit precursor1e-62238
NC_000913:1087062:110317411031741103629456Escherichia coli K12, complete genomecurlin nucleator protein, minor subunit in curli complex2e-62237
AC_000091:1083798:110419211041921104647456Escherichia coli W3110 DNA, complete genomecurlin nucleator protein, minor subunit in curli complex2e-62237
NC_008258:1076922:109815310981531098608456Shigella flexneri 5 str. 8401, complete genomeminor curlin subunit precursor2e-62237
NC_016514:1701273:170901317090131709504492Enterobacter cloacae EcWSU1 chromosome, complete genomeMinor curlin subunit3e-61233
NC_015968:1709680:171923417192341719689456Enterobacter asburiae LF7a chromosome, complete genomeCurlin associated repeat-containing protein1e-59228
NC_014121:2629075:264073326407332641188456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeminor curlin subunit4e-58223
NC_018868:1960542:201483420148342015388555Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomePPE repeat-containing protein3e-1167.4