Pre_GI: BLASTP Hits

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Query: NC_013716:1138441:1163312 Citrobacter rodentium ICC168, complete genome

Start: 1163312, End: 1165054, Length: 1743

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010681:221416:2431602431602449381779Burkholderia phytofirmans PsJN chromosome 1, complete sequenceGluconate 2-dehydrogenase (acceptor)0719
NC_016845:3024041:3051338305133830531221785Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gluconate 2-dehydrogenase0641
NC_012731:2974745:2995710299571029974941785Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeglucose-methanol-choline oxidoreductase0641
NC_009648:2252757:2281377228137722831611785Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomemonooxygenase, FAD-binding; glucose-methanol-choline oxidoreductase0641
NC_014532:2664139:2667020266702026687891770Halomonas elongata DSM 2581, complete genomegluconate dehydrogenase1e-175617
NC_014323:5219154:5234638523463852364101773Herbaspirillum seropedicae SmR1 chromosome, complete genomecholine dehydrogenase-like protein4e-168591
NC_014306:3210311:3210311321031132120771767Erwinia billingiae Eb661, complete genomeGluconate 2-dehydrogenase (acceptor)7e-165580
NC_014306:4901390:4922021492202149237931773Erwinia billingiae Eb661, complete genomeGluconate 2-dehydrogenase (Acceptor)3e-147522
NC_008786:1767315:1782075178207517838351761Verminephrobacter eiseniae EF01-2, complete genomeglucose-methanol-choline oxidoreductase8e-143507
NC_010794:1476494:1492811149281114943881578Methylacidiphilum infernorum V4, complete genomeGlucose-methanol-choline (GMC) oxidoreductase:NAD binding subunit1e-35151
NC_008786:3045770:3049436304943630510041569Verminephrobacter eiseniae EF01-2, complete genomeglucose-methanol-choline oxidoreductase1e-35151
NC_010506:3585533:3587215358721535887981584Shewanella woodyi ATCC 51908, complete genomeglucose-methanol-choline oxidoreductase5e-34146
NC_010682:2642269:2645805264580526473731569Ralstonia pickettii 12J chromosome 1, complete sequenceGluconate 2-dehydrogenase (acceptor)4e-30133
NC_016943:1314500:1343028134302813446891662Blastococcus saxobsidens DD2, complete genome2-methyl 1,2 propanediol dehydrogenase8e-28125
NC_019964:2680935:2702910270291027045411632Halovivax ruber XH-70, complete genomecholine dehydrogenase-like flavoprotein1e-24115
NC_011071:1178423:1194577119457711962621686Stenotrophomonas maltophilia R551-3, complete genomeglucose-methanol-choline oxidoreductase2e-24114
NC_015947:1142206:1157999115799911596841686Burkholderia sp. JV3 chromosome, complete genomeglucose-methanol-choline oxidoreductase7e-24112
NC_015145:92397:1055861055861071541569Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomecholine dehydrogenase-like flavoprotein9e-23108
NC_013061:2247191:2269971226997122716471677Pedobacter heparinus DSM 2366, complete genomehypothetical protein3e-22107
NC_007484:495784:5014145014145030601647Nitrosococcus oceani ATCC 19707, complete genomeGlucose-methanol-choline oxidoreductase2e-20101
NC_013209:2414500:2432626243262624342631638Acetobacter pasteurianus IFO 3283-01, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017100:2414075:2433833243383324354701638Acetobacter pasteurianus IFO 3283-03, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017108:2413000:2431170243117024328071638Acetobacter pasteurianus IFO 3283-12, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017111:2413000:2431188243118824328251638Acetobacter pasteurianus IFO 3283-32, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017121:2413000:2431175243117524328121638Acetobacter pasteurianus IFO 3283-07, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017125:2415500:2433813243381324354501638Acetobacter pasteurianus IFO 3283-22, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_017146:2416000:2433855243385524354921638Acetobacter pasteurianus IFO 3283-26, complete genomesolbitol dehydrogenase large subunit2e-20101
NC_018145:50237:7055370553721901638Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeFAD dependent oxidoreductase1e-20101
NC_015566:4350080:4350080435008043517351656Serratia sp. AS12 chromosome, complete genomeputative dehydrogenase subunit1e-1998.2
NC_012856:798922:8168958168958185171623Ralstonia pickettii 12D chromosome 1, complete genomeglucose-methanol-choline oxidoreductase1e-1792
NC_015955:616839:6392066392066408881683Halophilic archaeon DL31 plasmid phalar01, complete sequenceFAD dependent oxidoreductase2e-1791.3
NC_014315:2787089:2816044281604428176691626Nitrosococcus watsoni C-113 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1584.7
NC_010505:2530476:2548762254876225504051644Methylobacterium radiotolerans JCM 2831, complete genomeglucose-methanol-choline oxidoreductase9e-1582.4
NC_009921:5275694:5287771528777152895101740Frankia sp. EAN1pec, complete genomeglucose-methanol-choline oxidoreductase2e-1481.6
NC_006576:12230:3230832308338941587Synechococcus elongatus PCC 6301, complete genomedehydrogenase subunit-like protein2e-1378.2
NC_020126:117799:1455591455591470851527Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1377.8
NC_017030:5558429:5577510557751055789941485Corallococcus coralloides DSM 2259 chromosome, complete genomeGMC oxidoreductase2e-1274.3
NC_016027:229180:2305482305482322391692Gluconacetobacter xylinus NBRC 3288, complete genomesorbitol dehydrogenase large subunit6e-1066.2
NC_007912:174733:1905491905491919761428Saccharophagus degradans 2-40, complete genome2-keto-gluconate dehydrogenase subunit-like6e-1066.2
NC_007509:3668:3331333313349321620Burkholderia sp. 383 chromosome 3, complete sequenceGlucose-methanol-choline oxidoreductase1e-0862
NC_012586:897148:9078059078059102912487Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceFAD dependent oxidoreductase4e-0860.5
NC_016815:1543308:1561439156143915639252487Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceFAD dependent oxidoreductase3e-0860.5
NC_012660:3744868:3752842375284237544731632Pseudomonas fluorescens SBW25 chromosome, complete genomeputative oxidoreductase5e-0859.7
NC_009707:1338742:136158413615841361814231Campylobacter jejuni subsp. doylei 269.97 chromosome, complete1e-0758.5
NC_013960:3379515:3402954340295434044651512Nitrosococcus halophilus Nc4 chromosome, complete genomeglucose-methanol-choline oxidoreductase1e-0758.5
NC_015663:3466471:3484187348418734858541668Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative oxidoreductase protein6e-0756.2