Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1138441:1151198 Citrobacter rodentium ICC168, complete genome

Start: 1151198, End: 1151500, Length: 303

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase6e-25112
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase4e-24110
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase1e-22104
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein1e-22104
NC_010067:892729:914941914941915159219Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1891.7
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase1e-1375.1
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase1e-1271.6
CP002797:4812799:4826760482676048278061047Escherichia coli NA114, complete genomePutative integrase2e-1271.2
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family7e-1269.3
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase5e-1166.6
NC_007712:1712667:171266717126671713602936Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase8e-1165.9
NC_016816:2953530:2977372297737229783941023Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-0962
NC_014837:1570500:157833915783391578668330Pantoea sp. At-9b chromosome, complete genome2e-0961.6
NC_017265:2306500:232127223212722321541270Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-0858.9
NC_017168:3535786:354532035453203545544225Yersinia pestis A1122 chromosome, complete genomephage integrase family site specific recombinase1e-0858.5
NC_010159:2128157:214251321425132142737225Yersinia pestis Angola, complete genome1e-0858.5
NC_010634:2124185:213599021359902136214225Yersinia pseudotuberculosis PB1/+, complete genomephage integrase family site specific recombinase2e-0858.2