Pre_GI: BLASTP Hits

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Query: NC_013665:1766158:1790977 Methanocella paludicola SANAE, complete genome

Start: 1790977, End: 1791321, Length: 345

Host Lineage: Methanocella paludicola; Methanocella; Methanocellaceae; Methanocellales; Euryarchaeota; Archaea

General Information: This strain was isolated in Japan from rice paddy samples. Strain SANAE belongs to the Rice Cluster I (RC-I), a 16S rRNA and mcrA gene sequences-defined euryarchaeal lineage within Methanosarcinales and Methanomicrobiales. The RC-I group plays a key role in releasing methane from rice fields, which accounts for 10 to 25% of the global methane emissions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009464:931647:932620932620932970351Uncultured methanogenic archaeon RC-I, complete genomeputative transcription regulator (PadR family)6e-47185
NC_015589:814530:827671827671828009339Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein6e-2199.4
NC_015690:6595395:660345166034516603786336Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator1e-1994.7
NC_018664:2638102:264078026407802641118339Clostridium acidurici 9a chromosome, complete genometranscriptional regulator, PadR family7e-1889
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator7e-1579.3
NC_014393:4352216:437518143751814375525345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family1e-1478.6
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator1e-1478.6
NC_007907:4956500:496671849667184967065348Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1478.6
NC_011830:1037520:105271710527171053064348Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, PadR-like family5e-1476.3
NC_009712:334143:337653337653337979327Candidatus Methanoregula boonei 6A8, complete genomePadR-like family transcriptional regulator9e-1475.5
NC_015275:1480500:149883014988301499192363Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, PadR-like family1e-1272
NC_003366:863437:878020878020878352333Clostridium perfringens str. 13, complete genome30S ribosomal protein homolog2e-1271.2
NC_006348:2738425:275557927555792755920342Burkholderia mallei ATCC 23344 chromosome 1, complete sequencetranscriptional regulator, PadR family3e-1270.5
NC_008261:817295:834077834077834409333Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, PadR family3e-1270.5
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family4e-1270.1
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator4e-1270.1
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator4e-1270.1
NC_012673:785718:792796792796793152357Exiguobacterium sp. AT1b, complete genometranscriptional regulator, PadR-like family5e-1269.7
NC_013739:2057781:207558820755882075941354Conexibacter woesei DSM 14684, complete genometranscriptional regulator, PadR-like family6e-1269.3
NC_014393:4612301:463298446329844633328345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family7e-1269.3
NC_015144:367278:373210373210373542333Weeksella virosa DSM 16922 chromosome, complete genometranscriptional regulator, PadR-like family8e-1268.9
NC_014323:3976351:401955840195584019887330Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein9e-1268.9
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family1e-1168.6
NC_014328:3747973:375165537516553751996342Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative PadR family transcriptional regulator1e-1168.6
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator2e-1167.8
NC_004193:375416:420145420145420480336Oceanobacillus iheyensis HTE831, complete genomehypothetical protein4e-1166.6
NC_015690:790500:804304804304804633330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator6e-1166.2
NC_016935:789849:805610805610805939330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator6e-1166.2
NC_009033:755226:756710756710757102393Staphylothermus marinus F1, complete genometranscriptional regulator, PadR-like family6e-1166.2
NC_018748:495011:494685494685495014330Emticicia oligotrophica DSM 17448 chromosome, complete genometranscriptional regulator, PadR-like family1e-1065.5
NC_014335:4414052:441474244147424415086345Bacillus cereus biovar anthracis str. CI chromosome, completeputative PadR family transcriptional regulator1e-1065.1
NC_013037:6209424:621816562181656218518354Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, PadR-like family2e-1064.7
NC_007644:2452244:246911124691112469470360Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, PadR-like family2e-1064.7
NC_010184:4497473:450447345044734504817345Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family2e-1064.3
NC_003888:3111998:311595731159573116334378Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-1064.3
NC_008278:2813362:282291428229142823243330Frankia alni ACN14a, complete genomePutative PadR family transcriptional regulator2e-1064.3
NC_016048:2343500:235035923503592350718360Oscillibacter valericigenes Sjm18-20, complete genomeputative PadR family transcriptional regulator2e-1064.3
NC_005957:4472800:447576544757654476109345Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator, PadR family6e-1062.8
NC_015216:1278706:131078813107881311147360Methanobacterium sp. AL-21 chromosome, complete genomePadR-like family transcriptional regulator8e-1062.4
NC_013665:1865122:187697718769771877318342Methanocella paludicola SANAE, complete genomeputative PadR-like family transcriptional regulator1e-0962
NC_012778:364728:368015368015368353339Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0961.2
NC_019908:21970:400324003240364333Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein2e-0960.8
NC_014330:1010000:101901510190151019344330Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative transcriptional regulator4e-0960.5
NC_019908:2183215:219799821979982198327330Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscriptional regulator4e-0960.1
NC_013730:4573077:459200745920074592351345Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family3e-0857.4
NC_011660:1889504:189448518944851894811327Listeria monocytogenes HCC23 chromosome, complete genomePadR family transcriptional regulator6e-0856.2
NC_013730:2751484:278794927879492788323375Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family7e-0855.8
NC_015500:2417041:242087724208772421203327Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, PadR-like family1e-0755.1
NC_016109:8635989:863794386379438638305363Kitasatospora setae KM-6054, complete genomeputative PadR family transcriptional regulator2e-0754.7
NC_013406:1145268:114943211494321149938507Paenibacillus sp. Y412MC10 chromosome, complete genomePadR-like family transcriptional regulator2e-0754.3
NC_018704:1424728:142569314256931426040348Amphibacillus xylanus NBRC 15112, complete genomeputative PadR family transcriptional regulator2e-0754.3
NC_008555:696217:714185714185714511327Listeria welshimeri serovar 6b str. SLCC5334, complete genometranscriptional regulator, PadR family4e-0753.5
NC_015434:228912:250216250216250554339Verrucosispora maris AB-18-032 chromosome, complete genomePadR-like family transcriptional regulator5e-0753.1
NC_000854:1:9389381276339Aeropyrum pernix K1, complete genomeputative transcriptional regulator, PadR family7e-0752.8
NC_006582:2205154:221626422162642216584321Bacillus clausii KSM-K16, complete genometranscriptional regulator, PadR family1e-0651.6
NC_014963:4091910:410257441025744102915342Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator2e-0651.6
NC_012914:5194791:520760352076035207929327Paenibacillus sp. JDR-2, complete genometranscriptional regulator, PadR-like family2e-0650.8
NC_015683:2249949:227154922715492271923375Corynebacterium ulcerans BR-AD22 chromosome, complete genomePadR family transcription regulator2e-0650.8
NC_017317:2149794:217301021730102173384375Corynebacterium ulcerans 809 chromosome, complete genomePadR-family transcription regulator3e-0650.8
NC_014958:3131191:313175231317523132108357Deinococcus maricopensis DSM 21211 chromosome, complete genomePadR family transcriptional regulator3e-0650.4
NC_009720:4367584:438953543895354389993459Xanthobacter autotrophicus Py2, complete genomePadR-like family transcriptional regulator3e-0650.4
NC_012483:996555:101723810172381017600363Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family5e-0650.1
NC_014330:313813:319058319058319594537Brachyspira pilosicoli 95/1000 chromosome, complete genomePadR-like family transcriptional regulator5e-0650.1
NC_018607:1648607:165434816543481654884537Brachyspira pilosicoli B2904 chromosome, complete genomePadR-like family transcriptional regulator5e-0650.1
NC_019908:323375:339145339145339681537Brachyspira pilosicoli P43/6/78 chromosome, complete genomePadR-like family transcriptional regulator5e-0650.1
NC_014624:828943:843139843139843462324Eubacterium limosum KIST612 chromosome, complete genometranscription regulator (putative)4e-0650.1
NC_016935:1636278:169910916991091699438330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR family transcriptional regulator4e-0650.1
NC_018604:1137797:115229811522981152834537Brachyspira pilosicoli WesB complete genomePadR-like family transcriptional regulator5e-0649.7
NC_015690:1818333:183487818348781835210333Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein5e-0649.7
NC_004347:718091:749154749154749510357Shewanella oneidensis MR-1, complete genomehypothetical protein6e-0649.7
NC_013891:640784:661436661436661762327Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometranscriptional regulator, PadR family8e-0649.3
NC_007929:111092:122941122941123261321Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, PadR family8e-0649.3