Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1620445 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1620445, End: 1621602, Length: 1158

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012483:30784:3546835468367031236Acidobacterium capsulatum ATCC 51196, complete genomeGDSL-like lipase/acylhydrolase family protein4e-39162
NC_010571:3903500:3916826391682639180731248Opitutus terrae PB90-1, complete genomelipolytic protein G-D-S-L family8e-38158
NC_013929:66500:7330273302749421641Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-34146
NC_011071:1773847:1790810179081017920661257Stenotrophomonas maltophilia R551-3, complete genomelipolytic protein G-D-S-L family4e-33142
NC_020418:3102460:3106126310612631072801155Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-33142
NC_016113:887582:8929518929518942131263Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein1e-31137
NC_016582:8031000:8043979804397980452861308Streptomyces bingchenggensis BCW-1 chromosome, complete genomesecreted protein4e-31135
NC_015953:2640500:2644763264476326460131251Streptomyces sp. SirexAA-E chromosome, complete genomeG-D-S-L family lipolytic protein2e-28127
NC_016114:4614924:4629980462998046312421263Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeG-D-S-L family lipolytic protein3e-25116
NC_010572:5445081:5460330546033054616161287Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative secreted protein3e-25116
NC_003888:3138905:3145726314572631470901365Streptomyces coelicolor A3(2), complete genomesecreted protein9e-25114
NC_013131:3222500:3237123323712332383131191Catenulispora acidiphila DSM 44928, complete genomelipolytic protein G-D-S-L family2e-1997.1
NC_007929:165518:1840641840641851971134Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein9e-0755.1