Pre_GI: BLASTP Hits

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Query: NC_013410:155236:169385 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 169385, End: 171148, Length: 1764

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:4805413:4824611482461148263171707Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeadenylylsulfate reductase subunit alpha0783
NC_012778:1946924:1959983195998319617071725Eubacterium eligens ATCC 27750, complete genomeadenylylsulfate reductase0761
NC_013192:374000:3815373815373832911755Leptotrichia buccalis DSM 1135, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein0737
NC_015275:53871:6230062300640451746Clostridium lentocellum DSM 5427 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein0699
NC_018664:2638102:2646831264683126485221692Clostridium acidurici 9a chromosome, complete genomeadenylylsulfate reductase, subunit alpha0680
NC_017295:95919:1143571143571160361680Clostridium acetobutylicum EA 2018 chromosome, complete genomeadenylylsulfate reductase0665
NC_015687:95918:1143561143561160351680Clostridium acetobutylicum DSM 1731 chromosome, complete genomeadenylylsulfate reductase subunit alpha0665
NC_003030:95918:1143561143561160351680Clostridium acetobutylicum ATCC 824, complete genomeadenylylsulfate reductase0665
NC_014634:28690:3446234462361321671Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencedissimilatory adenylylsulfate reductase alpha subunit precursor5e-154545
NC_015589:814530:8380948380948398541761Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein2e-112406
NC_013741:1068170:1078347107834710802871941Archaeoglobus profundus DSM 5631, complete genomeadenylylsulfate reductase, alpha subunit7e-84311
NC_019940:1309359:1318328131832813202171890Thioflavicoccus mobilis 8321 chromosome, complete genomeadenosine phosphosulfate reductase subunit alpha6e-73275
NC_016070:371185:3929583929583948381881Thermoproteus tenax Kra 1, complete genomeadenylylsulfate reductase subunit A6e-72272
NC_013959:1723037:1728829172882917307211893Sideroxydans lithotrophicus ES-1 chromosome, complete genomeadenylylsulfate reductase, alpha subunit6e-69262
NC_009465:90000:1008961008961027791884Candidatus Vesicomyosocius okutanii HA, complete genomeadenylylsulfate reductase subunit alpha2e-67257
NC_016885:809000:8509378509378528261890Pyrobaculum oguniense TE7 chromosome, complete genomeadenosine phosphosulfate reductase, alpha subunit2e-66254
NC_015499:1640500:1649013164901316509681956Thermodesulfobium narugense DSM 14796 chromosome, complete genomeadenylylsulfate reductase, alpha subunit3e-66253
NC_006138:1245944:1246431124643112484522022Desulfotalea psychrophila LSv54, complete genomeadenylylsulfate reductase3e-64246
NC_014365:1094516:1094516109451610963841869Desulfarculus baarsii DSM 2075 chromosome, complete genomedissimilatory adenylylsulfate reductase alpha subunit precursor2e-63244
NC_011296:1750771:1758963175896317609511989Thermodesulfovibrio yellowstonii DSM 11347, complete genomeadenylylsulfate reductase subunit alpha4e-60233
NC_003364:1528762:1529036152903615304241389Pyrobaculum aerophilum str. IM2, complete genomeadenylylsulfate reductase8e-59228
NC_015682:150808:1687771687771707772001Thermodesulfobacterium sp. OPB45 chromosome, complete genomeadenylylsulfate reductase subunit alpha4e-58226
NC_014972:847099:8551328551328571472016Desulfobulbus propionicus DSM 2032 chromosome, complete genomedissimilatory adenylylsulfate reductase subunit alpha6e-58225
NC_018750:7653000:7670854767085476736282775Streptomyces venezuelae ATCC 10712, complete genomeputative reductase7e-39162
NC_015942:63440:8020980209819391731Acidithiobacillus ferrivorans SS3 chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein2e-38161
NC_015376:2061990:2084468208446820862521785Burkholderia gladioli BSR3 chromosome chromosome 2, completefumarate reductase/succinate dehydrogenase flavoprotein domain protein4e-37156
NC_008390:2156188:2156955215695521586941740Burkholderia cepacia AMMD chromosome 1, complete sequencefumarate reductase/succinate dehydrogenase flavoprotein domain protein6e-37155
NC_010172:3712000:3714179371417937159271749Methylobacterium extorquens PA1, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein7e-37155
NC_012988:4075429:4080107408010740818701764Methylobacterium extorquens DM4, complete genomesuccinate dehydrogenase flavoprotein subunit2e-36154
NC_012808:3711806:3712054371205437138411788Methylobacterium extorquens AM1, complete genomeputative Succinate dehydrogenase flavoprotein subunit1e-35151
NC_010510:409469:4192214192214209721752Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-33143
NC_015573:3243613:3265003326500332667151713Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeL-aspartate oxidase6e-1996.3
NC_015573:3243613:3248228324822832499341707Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeL-aspartate oxidase1e-1792
NC_016582:389729:3910443910443927681725Streptomyces bingchenggensis BCW-1 chromosome, complete genomesuccinate dehydrogenase flavoprotein subunit5e-1790.1
NC_011881:89705:9248592485942121728Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeSuccinate dehydrogenase9e-1789
NC_016070:743255:7500147500147517621749Thermoproteus tenax Kra 1, complete genomesuccinate dehydrogenase/fumarate reductase flavoprotein subunit4e-1686.7
NC_016885:2091918:2173988217398821757331746Pyrobaculum oguniense TE7 chromosome, complete genomesuccinate dehydrogenase or fumarate reductase3e-1584
NC_007681:218921:2211932211932228661674Methanosphaera stadtmanae DSM 3091, complete genomeTfrA4e-1583.2
NC_009376:2102536:2109853210985321115981746Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesuccinate dehydrogenase flavoprotein subunit1e-1482
NC_011884:1413831:1413831141383114155581728Cyanothece sp. PCC 7425, complete genomesuccinate dehydrogenase or fumarate reductase, flavoprotein subunit4e-1480.1
NC_009338:555587:6002276002276019991773Mycobacterium gilvum PYR-GCK chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein8e-1479.3
NC_009077:2308634:2336576233657623383481773Mycobacterium sp. JLS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein8e-1479.3
NC_008146:1748026:1773157177315717749291773Mycobacterium sp. MCS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein-like protein8e-1479.3
NC_009077:1687304:1711473171147317132451773Mycobacterium sp. JLS, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein8e-1479.3
NC_009338:686932:6893666893666910721707Mycobacterium gilvum PYR-GCK chromosome, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein9e-1479
NC_016645:1838405:1843792184379218455371746Pyrobaculum sp. 1860 chromosome, complete genomesuccinate dehydrogenase flavoprotein subunit2e-1378.2
NC_013769:123958:1356001356001373001701Sulfolobus islandicus L.D.8.5 chromosome, complete genomesuccinate dehydrogenase or fumarate reductase, flavoprotein subunit2e-1378.2
NC_015573:813000:8594348594348610711638Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeL-aspartate oxidase5e-1376.6
NC_012792:310443:3217833217833235221740Variovorax paradoxus S110 chromosome 2, complete genomefumarate reductase/succinate dehydrogenase flavoprotein domain protein3e-1067.4
NC_018870:484000:4941434941434960891947Thermacetogenium phaeum DSM 12270 chromosome, complete genomefumarate reductase/succinate dehydrogenase-like protein4e-1067
NC_009012:2806000:2808454280845428100521599Clostridium thermocellum ATCC 27405, complete genomeL-aspartate oxidase6e-1066.2
NC_015573:3243613:3243613324361332451931581Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeL-aspartate oxidase4e-0963.5
NC_012691:2614603:2722212272221227239811770Tolumonas auensis DSM 9187, complete genomefumarate reductase, flavoprotein subunit7e-0962.8
NC_012658:1581486:1581486158148615827871302Clostridium botulinum Ba4 str. 657 chromosome, complete genomeL-aspartate oxidase9e-0962.4
NC_010814:1739706:1754460175446017560641605Geobacter lovleyi SZ, complete genomeL-aspartate oxidase9e-0962.4
NC_015519:426948:4450334450334465411509Tepidanaerobacter sp. Re1 chromosome, complete genomeL-aspartate oxidase1e-0862
NC_007759:2179000:2213430221343022151421713Syntrophus aciditrophicus SB, complete genomeL-aspartate oxidase2e-0861.2
NC_015555:430054:4360644360644376681605Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeL-aspartate oxidase2e-0861.2
NC_005090:1812833:1812833181283318146741842Wolinella succinogenes DSM 1740, complete genomeSUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT3e-0860.8
NC_012563:1681639:1682456168245616837571302Clostridium botulinum A2 str. Kyoto, complete genomeL-aspartate oxidase3e-0860.8
NC_007517:2165657:2180498218049821820931596Geobacter metallireducens GS-15, complete genomeL-aspartate oxidase6e-0859.7
NC_008312:3793760:3805467380546738071941728Trichodesmium erythraeum IMS101, complete genomesuccinate dehydrogenase or fumarate reductase, flavoprotein subunit7e-0859.7
NC_012731:403670:4261004261004278901791Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefumarate reductase flavoprotein subunit2e-0758.2
NC_020181:3518396:3516613351661335184031791Enterobacter aerogenes EA1509E, complete genomeSuccinate dehydrogenase flavoprotein subunit2e-0757.8
NC_009648:4958500:4980970498097049827601791Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomefumarate reductase flavoprotein subunit2e-0757.8
NC_015663:1934863:1952792195279219545821791Enterobacter aerogenes KCTC 2190 chromosome, complete genomefumarate reductase flavoprotein subunit3e-0757.4
NC_013850:4993307:4991524499152449933141791Klebsiella variicola At-22 chromosome, complete genomefumarate reductase, flavoprotein subunit4e-0757
NC_016845:411844:4346044346044363941791Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,fumarate reductase6e-0756.2
NC_012214:1117325:1140778114077811423941617Erwinia pyrifoliae Ep1/96, complete genomeL-aspartate oxidase8e-0755.8
NC_016612:1840325:1862691186269118644811791Klebsiella oxytoca KCTC 1686 chromosome, complete genomefumarate reductase flavoprotein subunit1e-0655.5
NC_012880:3241886:3260990326099032626091620Dickeya dadantii Ech703, complete genomeL-aspartate oxidase5e-0653.1
NC_014410:525645:5326925326925342961605Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,L-aspartate oxidase6e-0653.1
NC_017279:393255:4099834099834118181836Campylobacter jejuni subsp. jejuni IA3902 chromosome, completesuccinate dehydrogenase, flavoprotein subunit6e-0653.1
NC_002163:388595:4053334053334071681836Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomesuccinate dehydrogenase flavoprotein subunit6e-0653.1
NC_012779:2755338:2760409276040927621751767Edwardsiella ictaluri 93-146, complete genomesuccinate dehydrogenase, flavoprotein subunit, putative7e-0652.8
NC_011126:555483:5675575675575692571701Hydrogenobaculum sp. Y04AAS1, complete genomesuccinate dehydrogenase or fumarate reductase, flavoprotein subunit7e-0652.8
NC_003912:426676:4436154436154453451731Campylobacter jejuni RM1221, complete genomesuccinate dehydrogenase, flavoprotein subunit9e-0652.4
NC_019970:510632:5171235171235187271605Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeL-aspartate oxidase9e-0652.4