Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:53871 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53871553191449sucrose-6-phosphate hydrolaseQuickGO ontologyBLASTP
56549579431395copper amine oxidase-like domain-containing proteinQuickGO ontologyBLASTP
58431595071077sulfate ABC transporter periplasmic sulfate-binding proteinQuickGO ontologyBLASTP
5957760401825sulfate ABC transporter inner membrane subunit CysTQuickGO ontologyBLASTP
6040661206801sulfate ABC transporter inner membrane subunit CysWQuickGO ontologyBLASTP
61210622711062sulfate ABC transporter ATPase subunitQuickGO ontologyBLASTP
62300640451746fumarate reductasesuccinate dehydrogenase flavoprotein domain proteinQuickGO ontologyBLASTP
64029643433154Fe-4S ferredoxin iron-sulfur binding domain-containing proteinQuickGO ontologyBLASTP
6435865158801Sulfate adenylyltransferaseQuickGO ontologyBLASTP
65247669471701sulfate adenylyltransferase large subunitQuickGO ontologyBLASTP
66902685211620Ferredoxin--nitrite reductaseQuickGO ontologyBLASTP
7227772981705Phosphonate-transporting ATPaseQuickGO ontologyBLASTP
72981761963216protein of unknown function DUF214QuickGO ontologyBLASTP
785677863973tRNA-AlaQuickGO ontologyBLASTP
8201782505489GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP