Pre_GI: BLASTP Hits

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Query: NC_013199:2386924:2394724 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2394724, End: 2395914, Length: 1191

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010999:2483000:2487653248765324888431191Lactobacillus casei, complete genomePhosphopentomutase (Phosphodeoxyribomutase)1e-154546
NC_019970:2263427:2276961227696122781301170Thermoanaerobacterium thermosaccharolyticum M0795, complete genomephosphopentomutase2e-103376
NC_015555:1989463:2005001200500120061701170Thermoanaerobacterium xylanolyticum LX-11 chromosome, completePhosphopentomutase5e-102371
NC_009617:3647500:3657550365755036587401191Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphopentomutase2e-97355
NC_015425:718384:7243327243327255371206Clostridium botulinum BKT015925 chromosome, complete genomephosphopentomutase7e-97354
NC_019897:2004050:2024131202413120253091179Thermobacillus composti KWC4 chromosome, complete genomephosphopentomutase2e-96352
NC_015433:1315363:1315719131571913169301212Streptococcus suis ST3 chromosome, complete genomephosphopentomutase2e-94346
NC_020291:5093138:5108812510881251100021191Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphopentomutase DeoB7e-94344
NC_014150:2617072:2617072261707226182291158Brachyspira murdochii DSM 12563 chromosome, complete genomephosphopentomutase2e-92340
NC_011297:1296968:1298275129827512994531179Dictyoglomus thermophilum H-6-12, complete genomephosphopentomutase4e-91335
NC_015589:3085442:3103458310345831046391182Desulfotomaculum ruminis DSM 2154 chromosome, complete genomephosphopentomutase1e-90333
NC_018607:2375344:2375962237596223771221161Brachyspira pilosicoli B2904 chromosome, complete genomephosphopentomutase2e-89329
NC_009454:1246393:1247396124739612485801185Pelotomaculum thermopropionicum SI, complete genomephosphopentomutase4e-89328
NC_013517:1916020:1927423192742319286011179Sebaldella termitidis ATCC 33386, complete genomephosphopentomutase6e-89328
NC_014220:481923:5004355004355016101176Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomephosphopentomutase2e-87323
NC_017259:523840:5528555528555540781224Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,phosphopentomutase7e-77288
NC_014618:4010689:4035599403559940368221224Enterobacter cloacae SCF1 chromosome, complete genomephosphopentomutase8e-73274
NC_014837:3633378:3660842366084236620651224Pantoea sp. At-9b chromosome, complete genomephosphopentomutase1e-71270
NC_013716:5141269:5168865516886551700881224Citrobacter rodentium ICC168, complete genomephosphopentomutase2e-71270
NC_013956:3641368:3672081367208136733401260Pantoea ananatis LMG 20103 chromosome, complete genomeDeoB4e-71268
NC_020260:3277007:3300554330055433017771224Cronobacter sakazakii Sp291, complete genomephosphopentomutase1e-70266
NC_015696:610000:6176556176556188991245Francisella sp. TX077308 chromosome, complete genomephosphopentomutase1e-70266
NC_002942:675829:6771096771096783321224Legionella pneumophila subsp. pneumophila str. Philadelphia 1,phosphopentomutase3e-69262
NC_017379:1233482:1234183123418312354241242Helicobacter pylori Puno135 chromosome, complete genomephosphopentomutase4e-67255
NC_017378:1175639:1176337117633711775781242Helicobacter pylori Puno120 chromosome, complete genomephosphopentomutase2e-66253
NC_006322:717953:7288637288637300891227Bacillus licheniformis ATCC 14580, complete genomephosphopentomutase2e-30133
NC_006270:718169:7290807290807303061227Bacillus licheniformis ATCC 14580, complete genomephosphopentomutase2e-30133
NC_013198:394000:4285744285744298031230Lactobacillus rhamnosus GG, complete genomephosphopentomutase4e-1685.9