Pre_GI: BLASTP Hits

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Query: NC_013199:1407742:1409250 Lactobacillus rhamnosus Lc 705, complete genome

Start: 1409250, End: 1409897, Length: 648

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1678487:172707117270711727691621Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencechannel protein, hemolysin III family4e-1478.2
NC_008543:2666846:266831626683162668936621Burkholderia cenocepacia HI2424 chromosome 2, complete sequencechannel protein, hemolysin III family4e-1478.2
NC_008061:2582000:259805325980532598673621Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencechannel protein, hemolysin III family4e-1478.2
NC_014483:1973233:197801719780171978667651Paenibacillus polymyxa E681 chromosome, complete genomeHemolysin III-like protein1e-1273.2
NC_021182:2059143:207545520754552076105651Clostridium pasteurianum BC1, complete genomechannel protein, hemolysin III family3e-1272
NC_012914:5194791:520375752037575204392636Paenibacillus sp. JDR-2, complete genomechannel protein, hemolysin III family5e-1271.2
NC_020064:3825916:384733138473313848011681Serratia marcescens FGI94, complete genomechannel protein, hemolysin III family5e-1271.2
NC_008260:2961291:298232629823262983000675Alcanivorax borkumensis SK2, complete genomemembrane protein, hemolysin III homolog, putative4e-1271.2
NC_009725:2072475:210163021016302102268639Bacillus amyloliquefaciens FZB42, complete genomeYplQ8e-1270.5
NC_019842:2134803:215965321596532160291639Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hemolysin III8e-1270.5
NC_020410:2068500:209444020944402095078639Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative membrane hydrolase1e-1170.1
NC_008710:108057:114845114845115531687Borrelia turicatae 91E135, complete genomehypothetical protein1e-1170.1
NC_015589:1630461:164420516442051644855651Desulfotomaculum ruminis DSM 2154 chromosome, complete genomechannel protein hemolysin III family3e-1168.6
NC_012108:3824977:384579638457963846479684Desulfobacterium autotrophicum HRM2, complete genomeputative hemolysin-III related protein9e-1167
NC_013222:2795919:279977827997782800413636Robiginitalea biformata HTCC2501, complete genomeprobable hemolysin III1e-1066.6
NC_012658:1581486:158509715850971585735639Clostridium botulinum Ba4 str. 657 chromosome, complete genomehemolysin III5e-1064.3
NC_010673:113133:115070115070115759690Borrelia hermsii DAH, complete genomehypothetical protein6e-1064.3
NC_012563:1704345:172341317234131724051639Clostridium botulinum A2 str. Kyoto, complete genomehemolysin III6e-1064.3
NC_013956:3525711:354748235474823548159678Pantoea ananatis LMG 20103 chromosome, complete genomeYqfA1e-0962.8
NC_012785:638000:657498657498658199702Kosmotoga olearia TBF 19.5.1, complete genomechannel protein, hemolysin III family6e-0960.8
NC_014934:2985273:300677930067793007411633Cellulophaga algicola DSM 14237 chromosome, complete genomechannel protein, hemolysin iii family1e-0860.1
NC_007907:4714844:473482047348204735494675Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0858.5
NC_015844:3524175:353940335394033540035633Zobellia galactanivorans, complete genomehemolysin III7e-0857.4
NC_016584:1583685:158368515836851584335651Desulfosporosinus orientis DSM 765 chromosome, complete genomehemolysin III family channel protein6e-0754.3
NC_014393:187454:202676202676203320645Clostridium cellulovorans 743B chromosome, complete genomechannel protein, hemolysin III family3e-0652
NC_014472:2275254:228778022877802288415636Flavobacteriales bacterium HTCC2170 chromosome, complete genomeputative Hemolysin9e-0650.4