Pre_GI: BLASTP Hits

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Query: NC_013198:394000:405249 Lactobacillus rhamnosus GG, complete genome

Start: 405249, End: 405530, Length: 282

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012926:140000:176952176952177236285Streptococcus suis BM407 chromosome, complete genomePTS system lactose/cellobiose-specific family transporter subunit IIB1e-1891.3
NC_012467:1997484:199884319988431999127285Streptococcus pneumoniae P1031, complete genomephosphotransferase system, galactitol-specific IIB component5e-1889.7
NC_007712:3511500:351721135172113517483273Sodalis glossinidius str. 'morsitans', complete genomeputative PTS system IIB component5e-1372.8
NC_014228:2812000:283069528306952830982288Xenorhabdus nematophila ATCC 19061, complete genomeputative sugar phosphotransferase component II B9e-1062.4
NC_009053:1942973:194776319477631948035273Actinobacillus pleuropneumoniae L20, complete genomePhosphotransferase system, galactitol-specific IIB component1e-0962
NC_015224:3225000:322552132255213225808288Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phosphotransferase enzyme II, B component2e-0961.2
NC_013508:3188978:319260131926013192888288Edwardsiella tarda EIB202, complete genomephosphotransferase enzyme II, B component2e-0961.2
NC_008800:1459015:148022214802221480509288Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phosphotransferase enzyme II, B component4e-0960.1
NC_015425:641000:660238660238660543306Clostridium botulinum BKT015925 chromosome, complete genomePTS system transporter subunit IIB4e-0960.1
NC_004431:279868:307212307212307499288Escherichia coli CFT073, complete genomehypothetical protein5e-0960.1
NC_009648:1914621:192832219283221928588267Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomePTS family protein II component6e-0959.7
NC_012731:2650603:266430226643022664568267Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeascorbate-specific PTS family enzyme IIB component6e-0959.7
NC_016845:2691129:270484927048492705115267Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,PTS family protein II component6e-0959.7
NC_015663:4447984:446125044612504461516267Enterobacter aerogenes KCTC 2190 chromosome, complete genomeascorbate-specific PTS family enzyme IIB component3e-0857
NC_020181:969599:975575975575975841267Enterobacter aerogenes EA1509E, complete genomeFIG01225319: hypothetical protein3e-0857
NC_008593:609723:611561611561611848288Clostridium novyi NT, complete genomePTS system, IIB component3e-0857
NC_013850:2685835:269188326918832692149267Klebsiella variicola At-22 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-0755.1
NC_003210:2721559:272288427228842723156273Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-0753.5
NC_013411:2975364:298698829869882987272285Geobacillus sp. Y412MC61, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-0652
NC_014915:2092678:212691921269192127203285Geobacillus sp. Y412MC52 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit1e-0652
NC_006510:2044347:206396020639602064145186Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-0649.7