Pre_GI: BLASTP Hits

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Query: NC_013198:298000:313942 Lactobacillus rhamnosus GG, complete genome

Start: 313942, End: 314400, Length: 459

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:282901:295974295974296432459Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)7e-80295
NC_014334:267409:282584282584283042459Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein1e-71267
NC_010999:252605:265015265015265473459Lactobacillus casei, complete genomePutative uncharacterized protein1e-71267
NC_008526:250000:265744265744266262519Lactobacillus casei ATCC 334, complete genomehypothetical protein5e-71266
NC_016641:3217201:323439132343913234825435Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein9e-25112
NC_007350:2019623:203680020368002037300501Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,hypothetical protein3e-22103
NC_014657:944000:964120964120964575456Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein2e-1787.8
NC_012658:545840:553273553273553716444Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein6e-1476.3
NC_019978:1477724:149397414939741494405432Halobacteroides halobius DSM 5150, complete genomehypothetical protein7e-1372.8
NC_018664:1795223:180016318001631800633471Clostridium acidurici 9a chromosome, complete genomehypothetical protein DUF12124e-1270.5
NC_013171:636293:642273642273642749477Anaerococcus prevotii DSM 20548, complete genomehypothetical protein1e-1168.6
NC_010376:1175916:118806511880651188538474Finegoldia magna ATCC 29328, complete genomehypothetical protein8e-1165.9
NC_013316:3056925:307887130788713079344474Clostridium difficile R20291, complete genomehypothetical protein1e-1065.5
NC_009089:3142976:316509731650973165570474Clostridium difficile 630, complete genomehypothetical protein1e-1065.5
NC_014376:869749:872546872546872965420Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein2e-0961.6
NC_016776:3181706:320042532004253200949525Bacteroides fragilis 638R, complete genomehypothetical protein5e-0960.1
NC_006347:3082921:310164031016403102164525Bacteroides fragilis YCH46, complete genomeprobable integral membrane protein5e-0960.1
NC_003228:3143470:316293131629313163455525Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-0960.1
NC_013162:1043357:105674110567411057322582Capnocytophaga ochracea DSM 7271, complete genomeconserved hypothetical protein-like protein2e-0754.3
NC_021182:2360500:236072923607292361163435Clostridium pasteurianum BC1, complete genomehypothetical protein5e-0753.5