Pre_GI: BLASTP Hits

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Query: NC_012967:3696877:3712264 Escherichia coli B str. REL606 chromosome, complete genome

Start: 3712264, End: 3712947, Length: 684

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:126596:131490131490132173684Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeinner membrane lipoprotein1e-129462
NC_010468:111504:116572116572117255684Escherichia coli ATCC 8739, complete genomeputative inner membrane lipoprotein3e-129460
NC_009800:3787320:380410138041013804784684Escherichia coli HS, complete genomeputative lipoprotein4e-129460
CP002516:119935:124829124829125512684Escherichia coli KO11, complete genomeputative inner membrane lipoprotein1e-126452
CU928145:4131924:414946141494614150144684Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative exported protein1e-126452
CP002185:3964500:398056139805613981244684Escherichia coli W, complete genomeputative inner membrane lipoprotein1e-126452
NC_011748:4131924:414946141494614150144684Escherichia coli 55989, complete genomeconserved hypothetical protein; putative exported protein1e-126452
NC_009801:4073968:409059740905974091280684Escherichia coli E24377A, complete genomeputative lipoprotein1e-126452
NC_011415:4006500:402263040226304023313684Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-126452
NC_016902:119935:124829124829125512684Escherichia coli KO11FL chromosome, complete genomeputative inner membrane lipoprotein1e-126452
NC_004337:3590323:374437537443753744923549Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-99361
NC_010498:3988351:401309240130924013775684Escherichia coli SMS-3-5, complete genomeputative lipoprotein3e-84310
NC_007606:3755155:376694137669413767534594Shigella dysenteriae Sd197, complete genomeputative lipoprotein7e-76283