Pre_GI: BLASTP Hits

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Query: NC_012917:833721:855945 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 855945, End: 856526, Length: 582

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:913553:937554937554938135582Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative mutT/NUDIX family protein6e-108389
NC_013421:1038500:104165510416551042236582Pectobacterium wasabiae WPP163, complete genomeNUDIX hydrolase4e-101366
NC_012880:3748665:376694937669493767524576Dickeya dadantii Ech703, complete genomeNUDIX hydrolase4e-91333
NC_014837:3126543:313990131399013140479579Pantoea sp. At-9b chromosome, complete genomeNUDIX hydrolase2e-74278
NC_015761:2444833:245193024519302452505576Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-64244
NC_006155:3237990:325774432577443258367624Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein8e-64243
NC_010634:3155741:317525631752563175852597Yersinia pseudotuberculosis PB1/+, complete genomeNUDIX hydrolase9e-64242
NC_006351:2759708:276157627615762762172597Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein1e-54212
NC_009078:2718741:272248427224842723071588Burkholderia pseudomallei 1106a chromosome II, complete sequencenudix hydrolase, YffH family1e-54212
NC_007435:1446916:145065914506591451246588Burkholderia pseudomallei 1710b chromosome II, complete sequenceconserved hypothetical protein TIGR000521e-54212
NC_010623:188143:191830191830192417588Burkholderia phymatum STM815 chromosome 2, complete sequenceNUDIX hydrolase6e-54209
NC_007952:1416000:142246714224671423063597Burkholderia xenovorans LB400 chromosome 2, complete sequenceConserved hypothetical protein 528e-54209
NC_008060:476861:505264505264505863600Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase2e-53207
NC_008542:1021848:104991110499111050510600Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase2e-53207
NC_010508:981377:100316710031671003766600Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceNUDIX hydrolase2e-53207
NC_009832:2460027:246088324608832461479597Serratia proteamaculans 568, complete genomeNUDIX hydrolase6e-52203
NC_008752:3684739:368473936847393685347609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNUDIX hydrolase1e-50198
NC_014100:172452:171868171868172455588Caulobacter segnis ATCC 21756 chromosome, complete genomeNUDIX hydrolase2e-50198
NC_015138:2110149:212599021259902126571582Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completenucleoside diphosphate pyrophosphatase3e-50197
NC_002696:3759551:377783537778353778422588Caulobacter crescentus CB15, complete genomehypothetical protein7e-50196
NC_015638:2588954:260159626015962602174579Lacinutrix sp. 5H-3-7-4 chromosome, complete genomenucleoside diphosphate pyrophosphatase1e-47189
NC_017186:5184000:519829351982935198850558Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein6e-47186
NC_014318:5183975:519825951982595198816558Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein6e-47186
NC_010572:1293786:129721412972141297921708Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-46184
NC_013521:107937:124163124163124873711Sanguibacter keddieii DSM 10542, complete genomeprotein containing C-terminal region of TrgB protein2e-45181
NC_011666:2435438:243962924396292440225597Methylocella silvestris BL2, complete genomeNUDIX hydrolase7e-44176
NC_008344:2465042:248701224870122487647636Nitrosomonas eutropha C91, complete genomeNucleoside diphosphate pyrophosphatase3e-1995.1
NC_012115:1122905:114326811432681143843576Nautilia profundicola AmH, complete genomehypothetical protein4e-1787.8
NC_011420:1178762:119509311950931195734642Rhodospirillum centenum SW, complete genomehypothetical protein1e-1686.7
NC_010468:694943:716660716660717289630Escherichia coli ATCC 8739, complete genomeADP-ribose diphosphatase1e-1685.9
NC_013353:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009, complete genomeADP-ribose pyrophosphatase1e-1685.9
NC_012947:708064:728457728457729086630Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeADP-ribose pyrophosphatase NudF1e-1685.9
AP010958:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009 DNA, complete genomeADP-ribose pyrophosphatase1e-1685.9
NC_004578:5623783:564362756436275644244618Pseudomonas syringae pv. tomato str. DC3000, complete genomemutT/nudix family protein1e-1479.7
NC_016632:1399993:140161314016131402266654Serratia symbiotica str. 'Cinara cedri' chromosome, completeADP-ribose pyrophosphatase4e-1477.8
NC_014377:1227850:124090112409011241443543Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNUDIX hydrolase3e-1375.1
NC_015931:71361:756267562676159534Pyrolobus fumarii 1A, complete genomeNUDIX hydrolase6e-1373.9
NC_007802:1991211:1991211199121119923381128Jannaschia sp. CCS1, complete genomeNucleoside diphosphate pyrophosphatase1e-1272.8
NC_011661:1049767:106594210659421066496555Dictyoglomus turgidum DSM 6724, complete genomeNUDIX hydrolase5e-1167.4
NC_017063:834674:835992835992836630639Helicobacter pylori ELS37 chromosome, complete genomeUDP-sugar diphosphatase3e-1065.1
NC_012968:1731976:173740117374011737943543Methylotenera mobilis JLW8, complete genomeNUDIX hydrolase3e-1064.7
NC_008789:7347:298992989930540642Halorhodospira halophila SL1, complete genomeNUDIX hydrolase9e-1063.5
NC_019897:2004050:202928420292842029856573Thermobacillus composti KWC4 chromosome, complete genomeADP-ribose pyrophosphatase1e-0962.8
NC_007643:1781723:179533217953321795964633Rhodospirillum rubrum ATCC 11170, complete genomeNucleoside diphosphate pyrophosphatase1e-0962.8
NC_011744:688000:714370714370714942573Vibrio splendidus LGP32 chromosome 2, complete genomeMutT/nudix family protein8e-0960.1
NC_007614:2517226:253693425369342537533600Nitrosospira multiformis ATCC 25196 chromosome 1, completeNUDIX hydrolase2e-0859.3
NC_014654:1548194:155400015540001554533534Halanaerobium sp. 'sapolanicus' chromosome, complete genomeNUDIX hydrolase2e-0859.3
NC_005125:3446470:346624934662493466854606Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-0756.2
NC_003364:281000:302854302854303366513Pyrobaculum aerophilum str. IM2, complete genomeADP ribose hydrolase, putative (mutT/nudix family protein)1e-0755.8
NC_017080:3317701:331770133177013318288588Phycisphaera mikurensis NBRC 102666, complete genomeADP-ribose pyrophosphatase8e-0753.5
NC_016024:1099602:110120211012021101801600Candidatus Chloracidobacterium thermophilum B chromosome chromosomeNTP pyrophosphohydrolase1e-0652.8
NC_011146:4070000:407256040725604073081522Geobacter bemidjiensis Bem, complete genomeNUDIX hydrolase1e-0652.8
NC_015161:354000:358625358625359128504Deinococcus proteolyticus MRP chromosome, complete genomeNUDIX hydrolase9e-0650.1