Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3381822 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3381822, End: 3383279, Length: 1458

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:401786:4145874145874158611275Shigella flexneri 5 str. 8401, complete genomeputative periplasmic protein8e-78291
NC_008258:401786:416098416098417033936Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-42173
NC_010830:1543548:1551922155192215561304209Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-20101
NC_016048:1625812:1638521163852116414302910Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1894.4
NC_010830:1069666:1080998108099810833672370Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1790.1
NC_010830:1069666:1084709108470910867632055Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein8e-1789
NC_010830:1069666:1078070107807010809552886Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1584
NC_007614:109000:1097271097271111961470Nitrosospira multiformis ATCC 25196 chromosome 1, completeSel1-like repeat3e-1583.6
NC_010830:1124500:1137798113779811422794482Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-1582.8
NC_010830:475248:507427507427508383957Candidatus Amoebophilus asiaticus 5a2, complete genome2e-1480.5
NC_013959:1195249:120238612023861203339954Sideroxydans lithotrophicus ES-1 chromosome, complete genomeSel1 domain protein repeat-containing protein5e-1479.3
NC_007946:1119000:1127725112772511288611137Escherichia coli UTI89, complete genomehypothetical protein7e-1479
NC_015572:2186394:2191242219124221929961755Methylomonas methanica MC09 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein8e-1479
NC_014394:1989418:199750619975061998492987Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein1e-1378.2
NC_004431:1211000:1219723121972312208591137Escherichia coli CFT073, complete genomehypothetical protein1e-1378.2
NC_015581:1731120:1737854173785417389481095Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein4e-1376.6
NC_010830:1124500:1130165113016511357985634Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-1375.9
NC_016609:5763357:5770469577046957715811113Niastella koreensis GR20-10 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein7e-1375.9
NC_009445:7324977:7339392733939273413441953Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein8e-1375.5
NC_007512:944941:9620849620849635321449Pelodictyon luteolum DSM 273, complete genomeSel1-like repeat1e-1275.1
NC_020908:2571943:259270125927012593405705Octadecabacter arcticus 238, complete genome2e-1274.3
NC_010830:1171781:1177610117761011814553846Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein7e-1272.4
NC_004757:267165:2743522743522774503099Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein7e-1272.4
NC_015717:2479394:247939424793942480197804Hyphomicrobium sp. MC1, complete genomeSel1 domain-containing protein repeat-containing protein (fragment)8e-1272.4
NC_013440:1436784:1444937144493714464001464Haliangium ochraceum DSM 14365, complete genomeSel1 domain protein repeat-containing protein1e-1172
NC_010830:384812:3939843939844012257242Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1171.6
NC_016026:1969766:1972636197263619747802145Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative peptidoglycan binding domain-containing protein2e-1170.5
NC_013355:1332263:1332263133226313340621800Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeSel1 domain protein repeat-containing protein3e-1170.5
NC_014394:1594071:1605189160518916064091221Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein4e-1170.1
NC_010830:475248:5044185044185074263009Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1169.7
NC_010830:1543548:154751615475161548430915Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1169.7
NC_010830:1637598:1645106164510616473012196Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1068.2
NC_010830:1543548:1556591155659115582491659Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1066.2
NC_020908:2571943:259082325908232591314492Octadecabacter arcticus 238, complete genome7e-1065.9
NC_013209:2414500:241961124196112420327717Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein1e-0965.1
NC_017100:2414075:242081824208182421534717Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein1e-0965.1
NC_017108:2413000:241815524181552418871717Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein1e-0965.1
NC_017111:2413000:241817324181732418889717Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein1e-0965.1
NC_017121:2413000:241816024181602418876717Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein1e-0965.1
NC_017125:2415500:242079824207982421514717Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein1e-0965.1
NC_017146:2416000:242084024208402421556717Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein1e-0965.1
NC_017150:2290681:232735723273572328073717Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein1e-0965.1
NC_015731:313676:315414315414316016603Nitrosomonas sp. Is79A3 chromosome, complete genomeSel1 domain-containing protein1e-0965.1
NC_008347:3034100:3047264304726430485111248Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein2e-0964.7
NC_011149:1110642:112113511211351122100966Salmonella enterica subsp. enterica serovar Agona str. SL483,Sel1 domain protein repeat-containing protein1e-0964.7
NC_000921:1147394:116131911613191162089771Helicobacter pylori J99, complete genomehypothetical protein1e-0964.7
NC_015275:2712991:2728346272834627293981053Clostridium lentocellum DSM 5427 chromosome, complete genomeSel1 domain protein repeat-containing protein2e-0964.3
NC_010830:692469:6924696924696958733405Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0963.9
NC_020908:1472981:148604014860401486744705Octadecabacter arcticus 238, complete genomesel-1-like repeats-containing protein3e-0963.9
NC_020418:2084937:209256220925622093266705Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-0963.2
NC_010830:923266:9301679301679342674101Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-0962.8
NC_006138:225832:2412732412732423401068Desulfotalea psychrophila LSv54, complete genomesimilar to TPR repeat proteins9e-0962
NC_016048:4163225:4203176420317642059772802Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-0862
NC_010337:803748:842510842510843208699Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-0861.6
NC_016002:1048420:106260910626091063160552Pseudogulbenkiania sp. NH8B, complete genomeSel1 repeat-containing protein1e-0861.6
NC_014972:2089003:210678821067882107624837Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein2e-0861.2
NC_017059:1:587658766664789Rhodospirillum photometricum DSM 122, complete genomeTPR repeat SEL1 subfamily2e-0860.8
NC_014828:2657623:2659251265925126633844134Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSel1 domain protein repeat-containing protein5e-0859.7
NC_002939:2617037:262864526286452629286642Geobacter sulfurreducens PCA, complete genomehypothetical protein9e-0858.9
NC_011894:6295807:630494763049476305897951Methylobacterium nodulans ORS 2060, complete genomeSel1 domain protein repeat-containing protein1e-0758.5
NC_008570:2216736:2250885225088522519491065Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-0758.2
NC_013740:1178370:1187448118744811893971950Acidaminococcus fermentans DSM 20731, complete genomeSel1 domain protein repeat-containing protein1e-0758.2
NC_015873:2197412:219972421997242200527804Megasphaera elsdenii DSM 20460, complete genomesel1 repeat protein1e-0758.2
NC_009663:2500186:250582425058242506462639Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-0757
NC_013355:1332263:133712113371211338068948Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeSel1 domain protein repeat-containing protein3e-0757
NC_009075:1638789:164103716410371641783747Burkholderia pseudomallei 668 chromosome II, complete sequenceFOG TPR repeat, SEL1 subfamily3e-0757
NC_020908:2571943:2587957258795725891591203Octadecabacter arcticus 238, complete genomeputative Sel1-like protein4e-0756.6
NC_008347:3034100:3048523304852330497341212Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein4e-0756.6
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-0756.6
NC_016791:3953972:3986298398629839893123015Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein7e-0755.8
NC_008570:1986466:1996643199664319980311389Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein7e-0755.8
NC_005085:24623:484624846249127666Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein7e-0755.8
NC_009256:3540531:354177935417793542633855Burkholderia vietnamiensis G4 chromosome 1, complete sequenceSel1 domain-containing protein8e-0755.5
NC_017986:2687588:2696405269640526985792175Pseudomonas putida ND6 chromosome, complete genomeTPR repeat protein1e-0655.5
NC_015276:3321277:333708633370863337595510Marinomonas mediterranea MMB-1 chromosome, complete genomeSel1 domain protein repeat-containing protein1e-0654.7
NC_014355:1865003:1920679192067919226852007Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0654.3
NC_017078:179848:1930951930951944291335Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein3e-0653.9
NC_019903:1345585:1386162138616213890682907Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein4e-0653.5
NC_020063:1194000:1200666120066612017361071Enterobacteriaceae bacterium strain FGI 57, complete genomeTPR repeat-containing protein8e-0652.4
NC_004663:4373902:4380147438014743812921146Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein9e-0652