Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1845316 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1845316, End: 1845852, Length: 537

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3117639:313087331308733131409537Pectobacterium wasabiae WPP163, complete genomeRhodanese domain protein5e-59226
NC_014842:19411:350393503935566528Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceRhodanese domain-containing protein1e-32139
NC_012779:2664849:267831226783122678842531Edwardsiella ictaluri 93-146, complete genomeinner membrane protein YgaP1e-31135
NC_011750:2928990:296505629650562965580525Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-30132
NC_011742:2863316:288471728847172885241525Escherichia coli S88 chromosome, complete genomehypothetical protein1e-30132
NC_000913:2746886:279554227955422796066525Escherichia coli K12, complete genomepredicted inner membrane protein with hydrolase activity8e-31132
CP002185:2919752:294363529436352944159525Escherichia coli W, complete genomepredicted inner membrane protein with hydrolase activity8e-31132
NC_010473:2839902:288730728873072887831525Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein with hydrolase activity8e-31132
AC_000091:2747520:279617627961762796700525Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein with hydrolase activity8e-31132
NC_012759:2633949:268135426813542681878525Escherichia coli BW2952 chromosome, complete genomeputative inner membrane protein with hydrolase activity8e-31132
NC_011601:2998326:302338330233833023907525Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeinner membrane protein with hydrolase activity3e-30131
CU928160:2818750:284242928424292842953525Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein with hydrolase activity2e-30131
NC_007384:2933625:295718529571852957709525Shigella sonnei Ss046, complete genomehypothetical protein2e-30131
NC_011741:2818750:284242928424292842953525Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-30131
NC_016822:3065426:308934930893493089873525Shigella sonnei 53G, complete genomehypothetical protein2e-30131
NC_012967:2669182:269227326922732692797525Escherichia coli B str. REL606 chromosome, complete genomeputative inner membrane protein with hydrolase activity2e-30131
AP010958:3238742:326004532600453260569525Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted inner membrane protein3e-30130
NC_013353:3238742:326004532600453260569525Escherichia coli O103:H2 str. 12009, complete genomeinner membrane protein3e-30130
NC_013361:3651150:367596036759603676484525Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-30130
NC_013364:3339768:336113433611343361658525Escherichia coli O111:H- str. 11128, complete genomeputative inner membrane protein3e-30130
NC_010498:2847359:287113528711352871659525Escherichia coli SMS-3-5, complete genomeputative inner membrane protein1e-29129
NC_017047:3793000:380025638002563800786531Rahnella aquatilis HX2 chromosome, complete genomerhodanese domain-containing protein4e-28124
NC_015061:3725921:373559537355953736125531Rahnella sp. Y9602 chromosome, complete genomeRhodanese domain protein4e-28124
NC_020260:2725201:272520127252012725737537Cronobacter sakazakii Sp291, complete genomeInner membrane protein YgaP6e-26116
NC_013282:1256769:125676912567691257338570Cronobacter turicensis, complete genomeInner membrane protein ygaP2e-25114
NC_014733:107394:112664112664113029366Methylovorus sp. MP688 chromosome, complete genomerhodanese domain protein3e-0961.6
NC_007626:2354260:235532523553252355693369Magnetospirillum magneticum AMB-1, complete genomeRhodanese-related sulfurtransferase1e-0858.9
NC_013929:8474195:849314984931498493736588Streptomyces scabiei 87.22 chromosome, complete genomemembrane transporter2e-0858.5
NC_016616:1336000:133658513365851336998414Dechlorosoma suillum PS chromosome, complete genomeRhodanese-related sulfurtransferase6e-0857
NC_020389:1936000:195744119574411957884444Methanosarcina mazei Tuc01, complete genomehypothetical protein8e-0856.6
NC_012440:1841315:186556218655621865942381Persephonella marina EX-H1, complete genomehypothetical protein3e-0755.1
NC_013851:3392644:341470234147023415124423Allochromatium vinosum DSM 180 chromosome, complete genomeRhodanese domain protein3e-0754.3
NC_013929:8474195:849191684919168492284369Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-0753.5
NC_010524:3914880:392806939280693928491423Leptothrix cholodnii SP-6, complete genomeRhodanese domain protein1e-0652.8
NC_004369:41236:584065840659065660Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-0650.4