Pre_GI: BLASTP Hits

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Query: NC_012850:459315:470623 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Start: 470623, End: 471375, Length: 753

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015380:99919:105258105258106130873Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein2e-22105
NC_011884:2051723:206894220689422069712771Cyanothece sp. PCC 7425, complete genomemethyltransferase FkbM family4e-1582
NC_017323:599549:626325626325627071747Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceFkbM family methyltransferase4e-1375.1
NC_015666:1623790:164442316444231645262840Halopiger xanaduensis SH-6 chromosome, complete genomeFkbM family methyltransferase8e-1373.9
NC_009921:2565640:257128325712832572248966Frankia sp. EAN1pec, complete genomemethyltransferase FkbM family2e-1273.2
NC_013967:1375255:138555313855531386272720Haloferax volcanii DS2 chromosome, complete genomemethyltransferase AglP4e-1168.6
NC_020210:3169258:3184073318407331852451173Geobacillus sp. GHH01, complete genomeputative methyltransferase FkbM-family7e-1167.8
NC_015496:2279829:230194423019442302819876Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemethyltransferase FkbM family7e-1064.3
NC_011026:3009500:302244730224473023286840Chloroherpeton thalassium ATCC 35110, complete genomemethyltransferase FkbM family1e-0963.5
NC_013743:3020687:303259730325973033412816Haloterrigena turkmenica DSM 5511, complete genomemethyltransferase FkbM family2e-0963.2
NC_015578:61820:722217222173042822Treponema primitia ZAS-2 chromosome, complete genomemethyltransferase FkbM family2e-0962.8
NC_014729:1627620:164151316415131642238726Halogeometricum borinquense DSM 11551 chromosome, complete genomemethyltransferase, fkbm family2e-0962.8
NC_008212:1082006:109731310973131098029717Haloquadratum walsbyi DSM 16790, complete genomeS-adenosylmethionine-dependent methyltransferase homolog4e-0962
NC_017904:3415700:344221034422103442857648Mycobacterium sp. MOTT36Y chromosome, complete genomeFkbM family methyltransferase6e-0961.2
NC_008698:1612873:165527116552711656095825Thermofilum pendens Hrk 5, complete genomemethyltransferase FkbM family9e-0960.8
NC_008146:1016446:103992010399201040783864Mycobacterium sp. MCS, complete genomeMethyltransferase FkbM9e-0960.8
NC_014006:2999500:3008749300874930103171569Sphingobium japonicum UT26S chromosome 1, complete genomeputative methyltransferase1e-0860.5
NC_005027:1304887:130488713048871305777891Rhodopirellula baltica SH 1, complete genomeconserved hypothetical protein-putative methyltransferase1e-0860.1
NC_008705:1022252:104565410456541046427774Mycobacterium sp. KMS, complete genomemethyltransferase FkbM family2e-0859.3
NC_011666:3001513:300842730084273009224798Methylocella silvestris BL2, complete genomemethyltransferase FkbM family2e-0859.3
NC_010172:4064087:407249840724984073337840Methylobacterium extorquens PA1, complete genomemethyltransferase FkbM family5e-0858.5
NC_014205:842314:857464857464858288825Staphylothermus hellenicus DSM 12710 chromosome, complete genomemethyltransferase FkbM family9e-0857.4
NC_002607:795777:812621812621813382762Halobacterium sp. NRC-1, complete genomehypothetical protein1e-0757
NC_010364:787766:804610804610805371762Halobacterium salinarum R1, complete genomehypothetical protein1e-0757
NC_007484:1671835:168403416840341684747714Nitrosococcus oceani ATCC 19707, complete genomeMethyltransferase FkbM2e-0755.8
NC_009565:3299937:331905333190533320018966Mycobacterium tuberculosis F11, complete genomehypothetical protein5e-0755.1
NC_009525:3300456:331957233195723320537966Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein5e-0755.1
NC_015848:3343731:336420133642013365166966Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein5e-0755.1
NC_000962:3288464:330758033075803308545966Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein5e-0755.1
NC_017026:3282405:330152533015253302490966Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein5e-0755.1
NC_011832:366092:374900374900375670771Candidatus Methanosphaerula palustris E1-9c, complete genomemethyltransferase FkbM family4e-0755.1
NC_008769:3242453:326174132617413262706966Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein6e-0754.7
NC_012207:3237440:325456832545683255533966Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein6e-0754.7
NC_002945:3246278:326426832642683265233966Mycobacterium bovis AF2122/97, complete genomehypothetical protein6e-0754.7
NC_016804:3221818:324110632411063242071966Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein6e-0754.7
NC_009937:3324793:333558033355803336365786Azorhizobium caulinodans ORS 571, complete genomemethyltransferase6e-0754.7
NC_002755:3282785:330190033019003302874975Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein5e-0754.7
NC_019950:3306419:332851033285103329301792Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein7e-0754.3
NC_014355:2321957:233461023346102335359750Candidatus Nitrospira defluvii, complete genomeputative methyltransferase, FkbM family1e-0653.5
NC_007775:1002934:1020398102039810242493852Synechococcus sp. JA-3-3Ab, complete genomemethyltransferase, FkbM family1e-0653.5
NC_020541:625925:632216632216632980765Rhodanobacter sp. 2APBS1, complete genomemethyltransferase, FkbM family3e-0652.4
NC_013156:471978:494095494095494589495Methanocaldococcus fervens AG86, complete genomemethyltransferase FkbM family4e-0652
NC_015377:34445:478014780148601801Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencemethyltransferase FkbM family5e-0651.6