Pre_GI: BLASTP Hits

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Query: NC_012808:1979000:1996188 Methylobacterium extorquens AM1, complete genome

Start: 1996188, End: 1997405, Length: 1218

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010511:6756000:6761024676102467623371314Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter2e-112405
NC_010511:4696868:4750276475027647515891314Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter1e-111403
NC_011757:5048714:5084312508431250856251314Methylobacterium chloromethanicum CM4, complete genomemajor facilitator superfamily MFS_13e-102372
NC_009138:1843998:1845096184509618464061311Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-95348
NC_009659:2849000:2873464287346428747891326Janthinobacterium sp. Marseille chromosome, complete genomemajor facilitator superfamily oxalate/formate antiporter1e-75283
NC_010725:1003760:1029105102910510303941290Methylobacterium populi BJ001, complete genomemajor facilitator superfamily MFS_13e-74279
NC_011757:1146608:1172926117292611742181293Methylobacterium chloromethanicum CM4, complete genomemajor facilitator superfamily MFS_11e-73276
NC_010172:1079127:1126516112651611278081293Methylobacterium extorquens PA1, complete genomemajor facilitator superfamily MFS_11e-73276
NC_015566:3269469:3281506328150632827621257Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein4e-66252
NC_012731:2650603:2666711266671126681321422Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative permease of the major facilitator superfamily6e-62238
NC_016845:2691129:2707380270738027086781299Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,major facilitator superfamily protein7e-62238
NC_009648:1914621:1930853193085319321511299Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomemajor facilitator superfamily permease8e-62238
NC_007644:1603696:1624610162461016259051296Moorella thermoacetica ATCC 39073, complete genomeMajor facilitator superfamily MFS_12e-60233
NC_013158:1905643:1905643190564319068931251Halorhabdus utahensis DSM 12940, complete genomemajor facilitator superfamily MFS_15e-31135
NC_013849:337350:3417973417973431821386Ferroglobus placidus DSM 10642 chromosome, complete genomemajor facilitator superfamily MFS_13e-28126
NC_015573:1671000:1675445167544516766951251Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomemajor facilitator superfamily protein5e-28125
NC_014220:587826:6052766052766065111236Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomemajor facilitator superfamily MFS_13e-26119
NC_015435:1180455:1199323119932312003871065Metallosphaera cuprina Ar-4 chromosome, complete genomemajor facilitator transporter5e-25115
NC_009454:1577319:1651588165158816528321245Pelotomaculum thermopropionicum SI, complete genomenitrate/nitrite transporter5e-25115
NC_011601:3951324:3964865396486539660671203Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter9e-24111
NC_014219:2284000:2293925229392522951781254Bacillus selenitireducens MLS10 chromosome, complete genomemajor facilitator superfamily MFS_11e-23110
NC_010080:1911932:1939253193925319405091257Lactobacillus helveticus DPC 4571, complete genomePermease2e-23110
NC_008529:1514000:1536323153632315375191197Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completepermease of the major facilitator superfamily2e-22107
NC_004337:3590323:3681863368186336830711209Shigella flexneri 2a str. 301, complete genomeputative resistance protein2e-22107
NC_015968:204969:2093682093682105701203Enterobacter asburiae LF7a chromosome, complete genomeOxalate/Formate Antiporter2e-22107
NC_008054:1502210:1519474151947415207091236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative oxalate:formate antiporter3e-22106
NC_019908:323375:3376683376683389151248Brachyspira pilosicoli P43/6/78 chromosome, complete genomenitrate/nitrite transporter NarK2e-21103
NC_011660:366000:3870133870133882361224Listeria monocytogenes HCC23 chromosome, complete genomemajor facilitator family transporter2e-21103
NC_003212:2293425:2292205229220522934281224Listeria innocua Clip11262, complete genomehypothetical protein2e-21103
NC_018604:1137797:1150821115082111520681248Brachyspira pilosicoli WesB complete genomenitrate/nitrite transporter, NarK4e-21102
NC_014330:313813:3198243198243210711248Brachyspira pilosicoli 95/1000 chromosome, complete genomenitrate/nitrite transporter, NarK4e-21102
NC_010694:1250841:1253253125325312544821230Erwinia tasmaniensis, complete genomePutative resistance protein9e-21101
NC_018607:1648607:1655114165511416563611248Brachyspira pilosicoli B2904 chromosome, complete genomenitrate/nitrite transporter NarK1e-20101
NC_002937:1233000:1254740125474012560141275Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completemajor facilitator superfamily protein9e-1995.1
NC_015151:1162647:1176773117677311780471275Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeOxalate/formate antiporter1e-1894.7
NC_002570:2649759:2649759264975926510181260Bacillus halodurans C-125, complete genomehypothetical protein8e-1891.7
NC_011979:3112911:3112911311291131142061296Geobacter sp. FRC-32, complete genomemajor facilitator superfamily MFS_11e-1791.3
NC_013173:953633:9862869862869874671182Desulfomicrobium baculatum DSM 4028, complete genomemajor facilitator superfamily MFS_18e-1788.6
NC_012988:2455807:2480364248036424820071644Methylobacterium extorquens DM4, complete genomemajor facilitator family transporter2e-1480.5
NC_015315:1321000:1321972132197213230871116Thermoproteus uzoniensis 768-20 chromosome, complete genometransport protein, permease6e-1479
NC_014364:3286459:3299889329988933011301242Spirochaeta smaragdinae DSM 11293 chromosome, complete genomemajor facilitator superfamily MFS_12e-1377.4
NC_009511:4582188:4587859458785945891391281Sphingomonas wittichii RW1 chromosome, complete genomemajor facilitator transporter1e-1274.7
NC_012982:2730000:2743362274336227446451284Hirschia baltica ATCC 49814, complete genomemajor facilitator superfamily MFS_11e-1171.2
NC_015067:32500:3528835288365741287Bifidobacterium longum subsp. longum JCM 1217, complete genometransport protein2e-0963.9
NC_014815:5603000:5620958562095856223761419Micromonospora sp. L5 chromosome, complete genomemajor facilitator superfamily mfs_15e-0962.8
NC_010725:3917369:3942037394203739436741638Methylobacterium populi BJ001, complete genomemajor facilitator superfamily MFS_15e-0962.8
NC_014391:3596812:3599697359969736011151419Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemajor facilitator superfamily protein5e-0962.4
NC_012982:1597697:1602582160258216038231242Hirschia baltica ATCC 49814, complete genomemajor facilitator superfamily MFS_12e-0860.5
NC_016612:443398:4433984433984450471650Klebsiella oxytoca KCTC 1686 chromosome, complete genomemajor facilitator superfamily protein4e-0859.7
NC_012522:3867167:3869068386906838704021335Rhodococcus opacus B4, complete genomeputative MFS transporter6e-0858.9
NC_011894:3268850:3301520330152033031571638Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_013929:1611940:1633677163367716353291653Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-0757.8
NC_021064:1211480:1227935122793512290681134Propionibacterium avidum 44067, complete genomeoxalate/formate-specific permease3e-0756.6
NC_017191:467207:4784034784034796651263Bacillus amyloliquefaciens XH7 chromosome, complete genomecarboxylate transporter1e-0654.3
NC_017188:461177:4723814723814736431263Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein1e-0654.3
NC_009725:496443:5311475311475324391293Bacillus amyloliquefaciens FZB42, complete genomeYbfB2e-0653.9
NC_014363:114239:1402341402341415711338Olsenella uli DSM 7084 chromosome, complete genomemajor facilitator superfamily MFS_13e-0653.5
NC_016047:345491:3454913454913467441254Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein3e-0653.1
NC_011899:1603500:1608942160894216101141173Halothermothrix orenii H 168, complete genomemajor facilitator superfamily MFS_16e-0652.4