Pre_GI: BLASTP Hits

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Query: NC_012808:157156:163756 Methylobacterium extorquens AM1, complete genome

Start: 163756, End: 165474, Length: 1719

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008435:604772:6092996092996109421644Rhodopseudomonas palustris BisA53, complete genomephage integrase family protein7e-87322
NC_010511:1641416:1641416164141616429631548Methylobacterium sp. 4-46 chromosome, complete genomeintegrase domain-containing protein6e-77288
NC_017244:264921:2863552863552881031749Brucella melitensis M28 chromosome chromosome 1, complete sequencesite-specific recombinase, phage integrase family4e-66253
NC_017246:264917:2863502863502880981749Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein4e-66253
NC_010511:915313:9290119290119306001590Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-66253
NC_015857:265721:2874152874152891691755Brucella pinnipedialis B2/94 chromosome chromosome 1, completephage integrase family site specific recombinase2e-66253
NC_007761:241900:2560482560482576311584Rhizobium etli CFN 42, complete genomeputative recombinase protein, phage integrase family2e-66253
NC_007618:262415:2840352840352857891755Brucella melitensis biovar Abortus 2308 chromosome I, completePhage integrase:Phage integrase, N-terminal SAM-like8e-66251
NC_012441:264795:2864122864122881781767Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein8e-66251
NC_006932:266000:2876562876562894221767Brucella abortus biovar 1 str. 9-941 chromosome I, completesite-specific recombinase, phage integrase family8e-66251
NC_010742:264433:2860402860402878061767Brucella abortus S19 chromosome 1, complete sequencesite-specific recombinase, phage integrase family8e-66251
NC_011894:7563668:7595195759519575968111617Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein1e-62241
NC_011757:5742290:5776005577600557778041800Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein2e-55217
NC_015594:214500:2285072285072297541248Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeintegrase family protein7e-54212
NC_010172:5447189:5468358546835854696831326Methylobacterium extorquens PA1, complete genomeintegrase family protein3e-35150
NC_013456:2528284:2536921253692125386211701Vibrio sp. Ex25 chromosome 1, complete genomeintegrase2e-30134
NC_010725:356609:3691903691903708721683Methylobacterium populi BJ001, complete genomeintegrase family protein2e-26120
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase1e-21105
NC_002939:1866651:1874575187457518762451671Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, integrase2e-1997.8
NC_011894:1499229:150189715018971502505609Methylobacterium nodulans ORS 2060, complete genome2e-1997.8
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase8e-1995.9
NC_013446:4281250:4294269429426942959961728Comamonas testosteroni CNB-2, complete genomePhage integerase2e-1894.7
NC_009434:3611738:3619731361973136210711341Pseudomonas stutzeri A1501, complete genomeintegrase4e-1893.6
NC_009439:4661102:4664986466498646666801695Pseudomonas mendocina ymp, complete genomehypothetical protein9e-1892.4
NC_011662:1160887:1170392117039211715971206Thauera sp. MZ1T, complete genomehypothetical protein9e-1892
NC_013173:953633:9706779706779727402064Desulfomicrobium baculatum DSM 4028, complete genomeintegrase family protein3e-1790.5
NC_003902:1858349:1865420186542018668141395Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase5e-1686.3
NC_014307:1619000:1623749162374916253741626Ralstonia solanacearum CFBP2957 chromosome, complete genomephage integrase2e-1481.3
NC_012796:2683711:2690065269006526917561692Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase2e-1481.3
NC_009434:608765:6778376778376802902454Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-1481.3
NC_004463:1369165:137754113775411377936396Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein5e-1479.7
NC_008782:1863853:1871054187105418726701617Acidovorax sp. JS42, complete genomephage integrase family protein8e-1375.9
NC_016010:1822212:1855472185547218566231152Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase1e-1275.5
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family9e-1375.5
NC_016010:1169850:1185584118558411871041521Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeIntegrase XerC2e-1274.3
NC_015381:3789661:3796625379662537982231599Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage-related integrase1e-1172
NC_011663:2813033:2823925282392528257331809Shewanella baltica OS223 chromosome, complete genomeintegrase family protein1e-1171.6
NC_016010:1822212:1827666182766618291471482Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase1e-1171.6
NC_007508:1221500:1255730125573012572471518Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase2e-1171.2
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein2e-1171.2
NC_014973:1941500:1955814195581419571001287Geobacter sp. M18 chromosome, complete genomeintegrase family protein9e-1168.9
NC_012808:58701:6196261962637671806Methylobacterium extorquens AM1, complete genomehypothetical protein1e-1068.9
NC_010804:2808676:2815315281531528166851371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase / tyrosine recombinase2e-1067.8
NC_009256:3056000:3062577306257730639471371Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein2e-1067.8
NC_010084:695817:7080887080887094581371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein2e-1067.8
NC_011000:1023800:1035090103509010364601371Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related integrase2e-1067.8
NC_012918:1697860:1704183170418317054751293Geobacter sp. M21 chromosome, complete genomeintegrase family protein2e-1067.8
NC_014355:139324:1433791433791448211443Candidatus Nitrospira defluvii, complete genomeputative integrase3e-1067.4
NC_009952:2217877:2223872222387222254611590Dinoroseobacter shibae DFL 12, complete genomeputative integrase4e-1067
NC_015850:736680:7427277427277441751449Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein5e-1066.6
NC_009348:2034500:2041208204120820424731266Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase family site specific recombinase5e-1066.6
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase1e-0965.1
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein2e-0965.1
NC_007508:1221500:1227118122711812285991482Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase2e-0965.1
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase2e-0964.7
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0964.7
NC_010524:1005355:1017147101714710183131167Leptothrix cholodnii SP-6, complete genomeintegrase family protein2e-0964.7
NC_015850:1006980:1027150102715010289371788Acidithiobacillus caldus SM-1 chromosome, complete genomephage integrase3e-0963.9
NC_005773:4797242:4804838480483848066551818Pseudomonas syringae pv. phaseolicola 1448A, complete genomesite-specific recombinase, phage integrase family3e-0963.9
NC_008609:1394377:1408298140829814094431146Pelobacter propionicus DSM 2379, complete genomehypothetical protein4e-0963.5
NC_009434:608765:6764126764126776831272Pseudomonas stutzeri A1501, complete genomehypothetical protein5e-0963.5
NC_013855:56344:6317763177653152139Azospirillum sp. B510 plasmid pAB510a, complete sequenceintegrase6e-0963.2
NC_016803:593484:5983485983486000871740Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein5e-0963.2
NC_010682:460523:4676864676864692871602Ralstonia pickettii 12J chromosome 1, complete sequencephage integrase6e-0962.8
NC_014153:2044500:2065464206546420667681305Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein1e-0862.4
NC_009720:216589:2196452196452212971653Xanthobacter autotrophicus Py2, complete genomeintegrase family protein1e-0862
NC_013854:1686997:1697457169745716991721716Azospirillum sp. B510, complete genomephage integrase family protein1e-0862
NC_008702:815264:8306858306858323551671Azoarcus sp. BH72, complete genomeputative integrase2e-0861.6
NC_016585:116143:1196871196871216841998Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein2e-0861.6
NC_009800:4529504:4532707453270745346561950Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family2e-0861.2
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase3e-0860.8
NC_009256:2509806:2517264251726425185321269Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase domain/SAM domain-containing protein3e-0860.8
NC_009850:1862602:1876559187655918780941536Arcobacter butzleri RM4018, complete genomehypothetical protein3e-0860.8
NC_007086:2887875:2931121293112129322631143Xanthomonas campestris pv. campestris str. 8004, complete genomephage-related integrase3e-0860.5
NC_015740:2614317:263366526336652634567903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-0860.5
NC_012796:2041579:2048611204861120503621752Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0860.5
NC_009434:3611738:3621234362123436224931260Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-0860.1
NC_007519:1782067:1787842178784217896921851Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein9e-0859.3
NC_014117:132524:1345211345211360951575Burkholderia sp. CCGE1002 chromosome chromosome 1, completehypothetical protein8e-0859.3
NC_010338:1394550:1401072140107214028381767Caulobacter sp. K31, complete genomehypothetical protein7e-0859.3
NC_014973:3452100:3471071347107134723601290Geobacter sp. M18 chromosome, complete genomeintegrase family protein7e-0859.3
NC_010688:3515885:3552388355238835537821395Xanthomonas campestris pv. campestris, complete genomephage-related integrase7e-0859.3
NC_010511:7024412:7031164703116470326931530Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0758.9
NC_007298:3764048:3776475377647537781541680Dechloromonas aromatica RCB, complete genomePhage integrase1e-0758.5
NC_014541:1231021:1236294123629412375351242Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein1e-0758.5
NC_021150:4350461:4356424435642443582321809Azotobacter vinelandii CA6, complete genomephage integrase-like protein1e-0758.5
NC_012560:4350465:4356428435642843582361809Azotobacter vinelandii DJ, complete genomephage integrase-like protein1e-0758.5
NC_014972:3604534:3621721362172136228721152Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein2e-0758.2
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-0758.2
NC_011757:4293000:4318726431872643204951770Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein2e-0757.8
NC_007516:1283210:1293375129337512945771203Synechococcus sp. CC9605, complete genomeSite-specific recombinase XerD-like2e-0757.8
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase3e-0757.4
NC_017075:1674758:1676897167689716786241728Rubrivivax gelatinosus IL144, complete genomephage integrase family protein7e-0756.2
NC_003919:1716831:1730204173020417315381335Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase7e-0756.2
NC_008347:1636660:1655238165523816569861749Maricaulis maris MCS10, complete genomephage integrase family protein6e-0756.2
NC_015422:3366500:3376628337662833779141287Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein6e-0756.2
NC_010688:1192410:1205404120540412068521449Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-0655.5
NC_015733:4130000:4140692414069241419091218Pseudomonas putida S16 chromosome, complete genomeintegrase family protein1e-0655.1
NC_003902:1858349:1882328188232818837761449Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase1e-0655.1
NC_010688:1192410:1196622119662211981871566Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-0655.1
NC_007005:5500196:550962255096225510575954Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase:Phage integrase, N-terminal SAM-like6e-0653.1