Pre_GI: BLASTP Hits

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Query: NC_012667:46432:61042 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 61042, End: 61590, Length: 549

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:207089:211981211981212529549Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-103373
NC_016446:979884:984776984776985324549Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-103373
NC_012580:207025:211929211929212477549Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein4e-103373
NC_002506:207097:212001212001212549549Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-103373