Pre_GI: BLASTP Hits

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Query: NC_012490:4425456:4438342 Rhodococcus erythropolis PR4, complete genome

Start: 4438342, End: 4439859, Length: 1518

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016906:3980122:3999338399933840007861449Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative ATP-binding protein7e-137487
NC_016906:181254:1956811956811971891509Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative ATP-binding protein1e-107390
NC_014666:8198554:8211524821152482130711548Frankia sp. EuI1c chromosome, complete genomeATP-binding region ATPase domain protein9e-104377
NC_019673:8161242:8175023817502381766331611Saccharothrix espanaensis DSM 44229 complete genomeATPase5e-86318
NC_009142:1701000:1714338171433817158401503Saccharopolyspora erythraea NRRL 2338, complete genomeATPase6e-85315
NC_009380:636000:6445806445806460941515Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein6e-81301
NC_014814:859124:8768268768268783401515Mycobacterium sp. Spyr1 chromosome, complete genomeDNA mismatch repair enzyme ( ATPase)2e-77290
NC_014311:1:1048410484119351452Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein4e-30132
NC_013757:780835:8040218040218053311311Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein5e-28126
NC_009380:636000:6372476372476385631317Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein4e-27123
NC_016582:7033000:7057992705799270599471956Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-26121
NC_011144:2770842:2773193277319327747161524Phenylobacterium zucineum HLK1, complete genomehypothetical protein2e-26120
NC_015497:4683741:4698040469804046994101371Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein8e-26118
NC_014008:3296708:3309807330980733113091503Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeATP-binding region ATPase domain protein1e-25118
NC_011566:4709672:4728291472829147297871497Shewanella piezotolerans WP3, complete genomehypothetical protein3e-25117
NC_013061:1052957:1086989108698910884491461Pedobacter heparinus DSM 2366, complete genomeATPase5e-25116
NC_008009:5044612:5068221506822150698101590Acidobacteria bacterium Ellin345, complete genomehypothetical protein8e-25115
NC_015138:5046921:5056260505626050577111452Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeATP-binding region ATPase domain-containing protein2e-24114
NC_016641:2587000:2594225259422525957001476Paenibacillus terrae HPL-003 chromosome, complete genomeATP-binding protein3e-24113
NC_014507:2174500:2180963218096321824681506Methanoplanus petrolearius DSM 11571 chromosome, complete genomeATP-binding region ATPase domain-containing protein3e-24113
NC_016947:2210339:2226740222674022280021263Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-23111
NC_020908:1889759:1896126189612618976341509Octadecabacter arcticus 238, complete genomeputative ATP-binding protein2e-23111
NC_008700:312099:3217363217363231871452Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein4e-23109
NC_015510:3273308:3287335328733532888161482Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeATP-binding domain-containing protein8e-23108
NC_007969:2885249:2908103290810329095631461Psychrobacter cryohalolentis K5, complete genomehypothetical protein2e-22107
NC_020126:5558613:5582401558240155844012001Myxococcus stipitatus DSM 14675, complete genomeATPase2e-22107
NC_015152:1602412:1616858161685816183451488Spirochaeta sp. Buddy chromosome, complete genomeATP-binding region ATPase domain-containing protein2e-22107
NC_014010:1392536:1434654143465414361231470Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein1e-21104
NC_009464:650997:6650886650886666471560Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein2e-20101
NC_015147:9761:1098410984124411458Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeDNA mismatch repair enzyme (predicted ATPase)1e-20101
NC_008095:4189082:4197665419766541992511587Myxococcus xanthus DK 1622, complete genomeATPase3e-20100
NC_017191:3766960:3774807377480737762641458Bacillus amyloliquefaciens XH7 chromosome, complete genometype II restriction-modification system4e-20100
NC_017190:3812065:3819912381991238213691458Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-binding protein4e-20100
NC_017188:3764061:3773115377311537745721458Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-binding protein4e-20100
NC_014551:3797047:3804889380488938063461458Bacillus amyloliquefaciens DSM 7, complete genomeATP-binding protein4e-20100
NC_016111:3052494:3063912306391230653871476Streptomyces cattleya NRRL 8057, complete genomeHistidine kinase4e-20100
NC_019842:3755275:3785338378533837867951458Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,type II restriction-modification system5e-2099.8
NC_016582:7033000:7052108705210870535831476Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATPase6e-2099.4
NC_016109:3963189:3981630398163039831021473Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1997.8
NC_015846:24771:3399933999355071509Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein4e-1996.3
NC_010322:5293652:5309753530975353113661614Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein7e-1995.9
NC_013757:780835:8002828002828018441563Geodermatophilus obscurus DSM 43160, complete genomeATPase8e-1995.5
NC_010814:243384:2626562626562642721617Geobacter lovleyi SZ, complete genomehypothetical protein3e-1893.6
NC_011989:2262881:2279501227950122809851485Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein1e-1792
NC_009848:720510:7278147278147293041491Bacillus pumilus SAFR-032, complete genomeATP-binding protein2e-1790.9
NC_012968:2000218:2013920201392020153501431Methylotenera mobilis JLW8, complete genomehypothetical protein2e-1584.3
NC_008686:2080770:2087606208760620891081503Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein1e-1481.6
NC_007492:857428:8709298709298726561728Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-1377.8
NC_009483:2854500:2863433286343328651331701Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein7e-1375.9
NC_009138:1843998:1859376185937618606831308Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative ATPase domain1e-1171.2
NC_013093:626473:6573886573886592771890Actinosynnema mirum DSM 43827, complete genomehypothetical protein6e-1169.3
NC_014820:582443:5923785923785940961719Cenarchaeum symbiosum A, complete genomeDNA mismatch repair enzyme3e-1067.4
NC_015564:2870631:2886293288629328881221830Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein9e-1065.5
NC_013929:3722867:3764351376435137662191869Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0861.2
NC_008435:2368000:2403533240353324054611929Rhodopseudomonas palustris BisA53, complete genomehypothetical protein6e-0859.3
NC_008435:2368000:2405755240575524073561602Rhodopseudomonas palustris BisA53, complete genomehypothetical protein3e-0757
NC_018866:2484500:2495934249593424977151782Dehalobacter sp. DCA chromosome, complete genomeDNA mismatch repair enzyme (predicted ATPase)5e-0756.6