Pre_GI: BLASTP Hits

Some Help

Query: NC_011988:1036618:1041205 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 1041205, End: 1041873, Length: 669

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008380:4078670:409749440974944098096603Rhizobium leguminosarum bv. viciae 3841, complete genomeputative TetR family transcriptional regulator3e-32138
NC_012850:3454270:347256334725633473165603Rhizobium leguminosarum bv. trifolii WSM1325, complete genometranscriptional regulator, TetR family7e-32137
NC_007761:3564449:358390635839063584508603Rhizobium etli CFN 42, complete genomeprobable transcriptional regulator protein, TetR family1e-31136
NC_010994:3666651:368539136853913685993603Rhizobium etli CIAT 652, complete genomeprobable transcriptional regulator protein, TetR family2e-31135
NC_003304:2507000:252007525200752520734660Agrobacterium tumefaciens str. C58 chromosome circular, completetranscriptional regulator, TetR family5e-31134
NC_003062:2506959:251996225199622520621660Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein5e-31134
NC_015183:2483653:250008725000872500746660Agrobacterium sp. H13-3 chromosome, complete genometranscriptional regulator, TetR family9e-26116
NC_010628:1734000:174749817474981748085588Nostoc punctiforme PCC 73102, complete genometranscriptional regulator, TetR family4e-1064.7
NC_014500:842493:846764846764847381618Dickeya dadantii 3937 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_003295:3421520:346908034690803469694615Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-0859.3
NC_015957:3067919:308703330870333087626594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR7e-0857.4
NC_008010:1:138201382014416597Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, TetR family3e-0652.4
NC_008463:4133700:414613741461374146754618Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator4e-0651.6