Pre_GI: BLASTP Hits

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Query: NC_011982:206784:208159 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 208159, End: 209580, Length: 1422

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015064:1984662:2006270200627020077031434Acidobacterium sp. MP5ACTX9 chromosome, complete genometransposase IS4 family protein3e-166585
NC_013508:3188978:321553132155313216289759Edwardsiella tarda EIB202, complete genomeputative transposase3e-78293
NC_008687:133728:147370147370148221852Paracoccus denitrificans PD1222 chromosome 2, complete sequencehypothetical protein9e-60231
NC_019902:2372097:2375856237585623781712316Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative transposase3e-56219
NC_018012:4221612:4233362423336242347351374Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein2e-54214
NC_002942:675829:6938216938216952271407Legionella pneumophila subsp. pneumophila str. Philadelphia 1,hypothetical protein2e-53209
NC_013194:963735:9811599811599824841326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein2e-50200
NC_013194:102000:1183211183211196461326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein2e-50200
NC_013851:3166969:3175505317550531768361332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-50200
NC_013851:608089:6126696126696140001332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-50200
NC_013851:3478153:3486974348697434883051332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein2e-50200
NC_008786:4040864:4045582404558240469011320Verminephrobacter eiseniae EF01-2, complete genometransposase, IS4 family protein4e-50199
NC_011982:206784:218078218078218695618Agrobacterium vitis S4 plasmid pTiS4, complete sequence3e-49196
NC_013851:2317091:2323976232397623253071332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein1e-46188
NC_013851:608089:6196996196996210301332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein1e-46188
NC_006513:148950:1534361534361547281293Azoarcus sp. EbN1, complete genometransposase, is4 family2e-46186
NC_006513:38818:4097640976422681293Azoarcus sp. EbN1, complete genomeputative transposase, is4 family2e-46186
NC_015723:1998363:2006489200648920075321044Cupriavidus necator N-1 chromosome 2, complete sequenceRNA-directed DNA polymerase RetA6e-41168
NC_010475:2188827:2205964220596422072921329Synechococcus sp. PCC 7002, complete genometransposase3e-38160
NC_019892:5368096:5369424536942453708091386Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein6e-38159
NC_008786:1553833:1569918156991815713061389Verminephrobacter eiseniae EF01-2, complete genometransposase, IS4 family protein7e-37155
NC_008786:492363:5112585112585123941137Verminephrobacter eiseniae EF01-2, complete genome1e-35150
NC_007712:4023516:4041346404134640425811236Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-34147
NC_017249:8165826:819132681913268191655330Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-34145
NC_013508:3188978:324034032403403240879540Edwardsiella tarda EIB202, complete genometransposase, ISLbp91e-29131
NC_008781:3302934:330379933037993304680882Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein2e-28127
NC_011601:1269500:1291265129126512926381374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc135e-28125
NC_011601:1466496:1481557148155714829301374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc135e-28125
NC_011601:1077548:1098701109870111000741374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc135e-28125
NC_021150:4201965:422616442261644226868705Azotobacter vinelandii CA6, complete genometransposase5e-26119
NC_012560:4201969:422616842261684226872705Azotobacter vinelandii DJ, complete genometransposase5e-26119
NC_004663:5437794:5439737543973754408461110Bacteroides thetaiotaomicron VPI-5482, complete genometransposase8e-26118
NC_008508:2572450:258394725839472584678732Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, ISLbp113e-25116
NC_008510:2605500:261720826172082617939732Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, ISLbp111e-24115
NC_010529:296500:301178301178301948771Cupriavidus taiwanensis plasmid pRALTA, complete sequencetransposase, IS4 family1e-23111
NC_014228:3505320:3523246352324635243671122Xenorhabdus nematophila ATCC 19061, complete genome2e-23110
NC_008508:2572450:258470225847022585358657Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, ISLbp44e-23109
NC_008510:2605500:261796326179632618619657Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, ISLbp44e-23109
NC_015186:2884866:2886469288646928878571389Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element5e-2099.4
NC_015186:347346:3618883618883632761389Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element5e-2099.4
NC_017249:8165826:819208981920898192355267Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-2098.6
NC_009484:775828:7862017862017875621362Acidiphilium cryptum JF-5 chromosome, complete genometransposase, IS4 family protein6e-1892.4
NC_014974:1570037:1587881158788115891611281Thermus scotoductus SA-01 chromosome, complete genometransposase, IS4 family protein7e-1685.5
NC_014974:404015:4109944109944122741281Thermus scotoductus SA-01 chromosome, complete genometransposase, IS4 family protein7e-1685.5
NC_010498:1117938:112305011230501123769720Escherichia coli SMS-3-5, complete genome4e-1583.2
NC_007946:1119000:112129311212931122186894Escherichia coli UTI89, complete genomehypothetical protein3e-1480.5
NC_008781:3302934:330468233046823305119438Polaromonas naphthalenivorans CJ2, complete genome5e-1479.7
NC_009485:1648896:1653244165324416544311188Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-1274.3
NC_004337:3590323:381860038186003819571972Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-1272.8
NC_016940:822892:8280798280798295511473Saprospira grandis str. Lewin chromosome, complete genometransposase2e-1171.2
NC_017249:8165826:819161581916158191800186Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1169.7
NC_010623:72500:101766101766102038273Burkholderia phymatum STM815 chromosome 2, complete sequence8e-1168.9
NC_016940:1698000:1716600171660017180451446Saprospira grandis str. Lewin chromosome, complete genometransposase9e-1168.6
NC_014718:102852:106526106526106960435Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTnp4e-1066.2
NC_008312:4731692:474735347473534747733381Trichodesmium erythraeum IMS101, complete genometransposase Tn52e-0964.3
NC_010529:296500:300612300612301157546Cupriavidus taiwanensis plasmid pRALTA, complete sequence9e-0962