Pre_GI: BLASTP Hits

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Query: NC_011961:891815:913237 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 913237, End: 914136, Length: 900

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011961:304158:313789313789314685897Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecatechol 2,3-dioxygenase2e-44179
NC_011961:891815:914189914189915154966Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-1997.4
NC_009512:3282500:328511932851193286057939Pseudomonas putida F1, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-1995.9
NC_016147:730810:742222742222743166945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3 dioxygenase1e-1790.5
NC_007973:1411714:143766914376691438613945Ralstonia metallidurans CH34 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase7e-1788.2
NC_014831:2133060:2143087214308721440941008Thermaerobacter marianensis DSM 12885 chromosome, complete genomecatechol 2,3 dioxygenase1e-1687.4
NC_014974:1076565:1082784108278410837881005Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase2e-1686.3
NC_021171:2019755:203625020362502037164915Bacillus sp. 1NLA3E, complete genomecatechol 2,3 dioxygenase4e-1685.5
NC_018697:505915:516478516478517398921Cycloclasticus sp. P1 chromosome, complete genomeCatechol 2,3 dioxygenase, XylE5e-1685.5
NC_016147:1788219:180071218007121801656945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3-dioxygenase2e-1582.8
NC_017276:337286:3428503428503438571008Sulfolobus islandicus REY15A chromosome, complete genomecatechol 2,3 dioxygenase3e-1582.4
NC_017275:377800:3825393825393835461008Sulfolobus islandicus HVE10/4 chromosome, complete genomecatechol 2,3 dioxygenase8e-1581.3
NC_014206:2971304:298556329855632986534972Geobacillus sp. C56-T3 chromosome, complete genomecatechol 2,3 dioxygenase8e-1581.3
NC_013769:316789:3407663407663417731008Sulfolobus islandicus L.D.8.5 chromosome, complete genomecatechol 2,3-dioxygenase1e-1480.9
NC_012726:346539:3519503519503529571008Sulfolobus islandicus M.16.4 chromosome, complete genomecatechol 2,3 dioxygenase1e-1480.9
NC_012589:347020:3524223524223534291008Sulfolobus islandicus L.S.2.15, complete genomecatechol 2,3 dioxygenase1e-1480.5
NC_011666:1572487:159318215931821594102921Methylocella silvestris BL2, complete genomecatechol 2,3 dioxygenase1e-1377.4
NC_014974:1076565:109546210954621096436975Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase1e-1377.4
NC_015514:3351052:3354194335419433552191026Cellulomonas fimi ATCC 484 chromosome, complete genomeBiphenyl-2,3-diol 1,2-dioxygenase2e-1377
NC_008148:2231045:2253126225312622541601035Rubrobacter xylanophilus DSM 9941, complete genomeCatechol 2,3-dioxygenase3e-1375.9
NC_002754:1061851:1062806106280610638131008Sulfolobus solfataricus P2, complete genomeCatechol 2,3-dioxygenase (metapyrocatechase)4e-1375.9
NC_010645:1341475:1361237136123713622411005Bordetella avium 197N, complete genomecatechol 2,3-dioxygenase (metapyrocatechase)1e-1273.9
NC_012589:842270:843742843742844689948Sulfolobus islandicus L.S.2.15, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-1273.9
NC_012622:940990:942462942462943409948Sulfolobus islandicus Y.G.57.14 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-1273.9
NC_012623:1631985:164739216473921648339948Sulfolobus islandicus Y.N.15.51 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-1273.9
NC_008702:2039462:204118420411842042116933Azoarcus sp. BH72, complete genomeprobable Catechol 2,3-dioxygenase2e-1273.6
NC_017275:594951:613328613328614275948Sulfolobus islandicus HVE10/4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase4e-1272.4
NC_017276:675229:676701676701677648948Sulfolobus islandicus REY15A chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase4e-1272
NC_012588:620353:638651638651639598948Sulfolobus islandicus M.14.25 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-1170.5
NC_012726:641763:660381660381661328948Sulfolobus islandicus M.16.4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-1170.5
NC_012632:638347:656645656645657592948Sulfolobus islandicus M.16.27 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1169.3
NC_016885:1153277:117191011719101172824915Pyrobaculum oguniense TE7 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-1067.4
NC_013730:4811911:483133248313324832291960Spirosoma linguale DSM 74, complete genomeCatechol 2,3-dioxygenase2e-1067
NC_008391:1210451:123441912344191235354936Burkholderia cepacia AMMD chromosome 2, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase3e-1066.2
NC_017506:1100679:113707611370761137948873Marinobacter adhaerens HP15 chromosome, complete genomecatechol 2,3-dioxygenase9e-1064.3
NC_003911:3864852:389731638973163898296981Silicibacter pomeroyi DSS-3, complete genomeextradiol ring-cleavage dioxygenase family protein3e-0962.8
NC_015957:196000:214414214414215349936Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase2e-0859.7
NC_017904:1725180:173459417345941735562969Mycobacterium sp. MOTT36Y chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase4e-0858.9
NC_007347:1215358:122718912271891228172984Ralstonia eutropha JMP134 chromosome 1, complete sequenceCatechol 2,3-dioxygenase8e-0857.8
NC_012522:5847699:5859095585909558601801086Rhodococcus opacus B4, complete genomeputative catechol 2,3-dioxygenase1e-0757.4
NC_016947:1480282:148880214888021489728927Mycobacterium intracellulare MOTT-02 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase2e-0756.6
NC_016582:2069677:206879620687962069680885Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase3e-0756.2
NC_014650:475662:502669502669503652984Geobacillus sp. Y4.1MC1 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-0756.2
NC_014121:677799:698372698372698905534Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeGlutathione transferase fosA9e-0754.7
NC_015968:511282:533820533820534242423Enterobacter asburiae LF7a chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase9e-0754.3
NC_015957:5082172:509665750966575097580924Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-0653.1
NC_009338:555587:567476567476568366891Mycobacterium gilvum PYR-GCK chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase6e-0651.6
NC_008705:1790222:183177418317741832664891Mycobacterium sp. KMS, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase1e-0551.2
NC_009077:1725683:176184917618491762739891Mycobacterium sp. JLS, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase1e-0551.2