Pre_GI: BLASTP Hits

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Query: NC_011901:625712:635222 Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete

Start: 635222, End: 635464, Length: 243

Host Lineage: Thioalkalivibrio sulfidophilus; Thioalkalivibrio; Ectothiorhodospiraceae; Chromatiales; Proteobacteria; Bacteria

General Information: Obligately chemolithoautotrophic, haloalkaliphilic, mesophilic, microaerophilic and sulfur-oxidizing bacterium. Uses CO2 as a carbon source and reduced inorganic sulfur compounds as an energy source. Utilizes ammonium and urea, but not nitrate or nitrite, as a N-source. Isolated from a full-scale Thiopaq bioreactor in the Netherlands used to remove H2S from biogas. Thioalkalivibrio species are commonly isolated from soda lakes and tend to dominate the microbial community of hypersaline soda lakes. These organisms have a pH optimum of 10 and are able to oxidize hydrogen sulfide to elemental sulfur. Thioalkalivibrio species have also been isolated from sulfide oxidizing bioreactors which remove sulfide from refinery and natural gas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011901:625712:6378466378466398131968Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system, M subunit; N-6 adenine-specific DNA methylase7e-28122
NC_015563:4911188:4922972492297249252962325Delftia sp. Cs1-4 chromosome, complete genomeN-6 DNA methylase9e-25112
NC_016816:3974895:3976280397628039786402361Pantoea ananatis LMG 5342, complete genometype I restriction-modification system, M subunit N-6 Adenine-specific DNA methylase3e-23107
NC_016816:3952000:3976280397628039786402361Pantoea ananatis LMG 5342, complete genometype I restriction-modification system, M subunit N-6 Adenine-specific DNA methylase3e-23107
NC_015663:2090442:2113596211359621159832388Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative type I restriction-modification system, methylase (M) subunit6e-23106
NC_009524:1627414:1627414162741416298342421Psychrobacter sp. PRwf-1 chromosome, complete genomeN-6 DNA methylase1e-21102
NC_014506:157396:1611251611251630831959Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeN-6 DNA methylase6e-2199.4
NC_014008:1463795:1484822148482214870832262Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeN-6 DNA methylase2e-1994.4
NC_006512:696000:6961036961036980851983Idiomarina loihiensis L2TR, complete genomeType I restriction-modification system methyltransferase subunit1e-1891.7
NC_008740:257434:2762382762382782231986Marinobacter aquaeolei VT8, complete genomeN-6 DNA methylase1e-1891.7
NC_008789:1237969:1258837125883712608161980Halorhodospira halophila SL1, complete genomeN-6 DNA methylase2e-1891.3
NC_009434:281474:2886092886092905281920Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, M subunit2e-1890.9
NC_008740:443274:4707754707754727601986Marinobacter aquaeolei VT8, complete genomeN-6 DNA methylase4e-1890.1
NC_009656:44500:8349783497854731977Pseudomonas aeruginosa PA7 chromosome, complete genomeN-6 DNA methylase1e-1685.5
NC_016830:5994494:6003200600320060051761977Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, DNA-methyltransferase subunit M2e-1684.3
NC_007484:3035068:3042946304294630449311986Nitrosococcus oceani ATCC 19707, complete genomeN-6 DNA methylase3e-1684
NC_011666:1661491:1671280167128016733012022Methylocella silvestris BL2, complete genomeN-6 DNA methylase3e-1683.6
NC_003919:3396136:3403937340393734059942058Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system DNA methylase6e-1579.3
NC_007519:2847816:2854571285457128565982028Desulfovibrio alaskensis G20 chromosome, complete genometype I restriction-modification system DNA methylase7e-1579.3
NC_009434:695582:7430807430807450561977Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, M subunit, putative1e-1478.6
NC_019907:773944:7800767800767821032028Liberibacter crescens BT-1 chromosome, complete genomeType I restriction-modification system, DNA-methyltransferase subunit M2e-1478.2
NC_010831:788500:7989417989418010012061Chlorobium phaeobacteroides BS1, complete genomeN-6 DNA methylase2e-1477.8
NC_014253:431942:4561424561424581812040Methanohalobium evestigatum Z-7303 chromosome, complete genomeN-6 DNA methylase2e-1477.8
NC_008752:3684739:3714751371475137168802130Acidovorax avenae subsp. citrulli AAC00-1, complete genomeN-6 DNA methylase2e-1477.4
NC_013161:4093322:4099155409915541011852031Cyanothece sp. PCC 8802, complete genomeN-6 DNA methylase2e-1374.3
NC_010498:4856011:4857545485754548595241980Escherichia coli SMS-3-5, complete genometype I restriction-modification system DNA methylase8e-1372.4
NC_012669:1700626:1708648170864817106331986Beutenbergia cavernae DSM 12333, complete genomeN-6 DNA methylase3e-1167
NC_005966:3334864:3351497335149733537522256Acinetobacter sp. ADP1, complete genomeputative type I restriction-modification system DNA methylase (HsdM)7e-1165.9
NC_015953:4746983:4755576475557647573211746Streptomyces sp. SirexAA-E chromosome, complete genomeN-6 DNA methylase9e-1165.9
NC_015434:4640769:4648963464896346507081746Verrucosispora maris AB-18-032 chromosome, complete genomeN-6 DNA methylase9e-1165.9
NC_008271:140846:1444271444271461631737Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system methyltransferase subunit1e-1065.1
NC_018524:4235773:4241459424145942434682010Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeN-6 DNA Methylase family protein2e-1064.3
NC_009077:2308634:2323208232320823243231116Mycobacterium sp. JLS, complete genomeN-6 DNA methylase3e-1063.5
NC_008751:607209:6205166205166222581743Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeN-6 DNA methylase4e-1063.5
NC_016582:4874500:4889314488931448914102097Streptomyces bingchenggensis BCW-1 chromosome, complete genomeN-6 DNA methylase5e-1063.2
NC_009142:949510:9761849761849781421959Saccharopolyspora erythraea NRRL 2338, complete genometype I restriction-modification system methyltransferase subunit9e-1062.4
NC_009049:1934398:1960316196031619621511836Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceN-6 DNA methylase1e-0962
NC_015576:1442713:1456592145659214585861995Mycobacterium sp. JDM601 chromosome, complete genometype I restriction/modification system DNA methylase HsdM1e-0962
NC_013169:1410384:1416790141679014187811992Kytococcus sedentarius DSM 20547, complete genometype I restriction-modification system methyltransferase subunit1e-0962
NC_007404:2743877:2754325275432527563552031Thiobacillus denitrificans ATCC 25259, complete genometype I restriction-modification system methyltransferase subunit1e-0962
NC_019964:2816990:2838172283817228401722001Halovivax ruber XH-70, complete genometype I restriction-modification system methyltransferase subunit1e-0962
NC_014972:247028:2448392448392470312193Desulfobulbus propionicus DSM 2032 chromosome, complete genomeN-6 DNA methylase2e-0961.2
NC_007508:1324000:1329738132973813319242187Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (modification subunit)3e-0960.5
NC_008340:2034810:2046261204626120484382178Alkalilimnicola ehrlichei MLHE-1, complete genomeN-6 DNA methylase3e-0960.5
NC_016943:2054688:2068351206835120703301980Blastococcus saxobsidens DD2, complete genomeType I restriction-modification system methyltransferase subunit3e-0960.5
NS_000195:219785:2476232476232496952073Candidatus Cloacamonas acidaminovoransType I restriction-modification system methyltransferase subunit3e-0960.5
NC_013093:1036772:1070989107098910730012013Actinosynnema mirum DSM 43827, complete genomeN-6 DNA methylase3e-0960.5
NC_010688:3740399:3749462374946237516482187Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (modification subunit)3e-0960.5
NC_004369:41236:4893748937509281992Corynebacterium efficiens YS-314, complete genomeputative restriction enzyme subunit S3e-0960.5
NC_013862:27991:2050205037921743Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceN-6 DNA methylase4e-0960.1
NC_007086:3805390:3815152381515238173382187Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction-modification system, M subunit, putative6e-0959.7
NC_015572:4618467:4635855463585546379752121Methylomonas methanica MC09 chromosome, complete genomeN-6 DNA methylase6e-0959.3
NC_006350:1084930:1107717110771711095581842Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative type I restriction-modification methylase2e-0858.2
NC_008702:1:5505550573461842Azoarcus sp. BH72, complete genomeSite-specific DNA-methyltransferase (adenine-specific)2e-0857.4
NC_008787:685401:7035977035977055071911Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction-modification system, M subunit4e-0856.6
NC_013861:3341955:3341955334195533440902136Legionella longbeachae NSW150, complete genometype I restriction-modification system (N6 DNA methylase)9e-0855.8
NC_009943:305854:3164413164413181501710Candidatus Desulfococcus oleovorans Hxd3, complete genomeN-6 DNA methylase2e-0754.3
NC_014408:1340016:1354294135429413563092016Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit M3e-0753.9
NC_013169:2351475:2358688235868823606221935Kytococcus sedentarius DSM 20547, complete genometype I restriction-modification system methyltransferase subunit3e-0753.9
NC_020541:1717140:1724200172420017264012202Rhodanobacter sp. 2APBS1, complete genometype I restriction-modification system methyltransferase subunit3e-0753.5
NC_014632:1112733:1146614114661411496042991Ilyobacter polytropus DSM 2926 chromosome, complete genomeN-6 DNA methylase1e-0652
NC_020156:861402:8674908674908697992310Nonlabens dokdonensis DSW-6, complete genomeputative DNA methylase5e-0649.7