Pre_GI: BLASTP Hits

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Query: NC_011770:2804218:2818646 Pseudomonas aeruginosa LESB58, complete genome

Start: 2818646, End: 2819023, Length: 378

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011992:1179084:119655611965561196912357Acidovorax ebreus TPSY, complete genometranscriptional regulator, ArsR family3e-30130
NC_008750:1253354:127078312707831271136354Shewanella sp. W3-18-1, complete genomeregulatory protein, ArsR3e-28123
NC_009668:529175:544473544473544787315Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceregulatory protein ArsR5e-23106
NC_008750:1253354:127357412735741273852279Shewanella sp. W3-18-1, complete genomeregulatory protein, ArsR2e-22104
NC_011770:2804218:280708128070812807305225Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-1582
NC_007626:4038054:406044740604474060731285Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator1e-1375.5
NC_010376:49185:701447014470512369Finegoldia magna ATCC 29328, complete genomeArsR family transcriptional regulator7e-1165.9
NC_014410:800500:837621837621837995375Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, ArsR family1e-0962
NC_010003:449192:466448466448466822375Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family1e-0962
NC_016633:3069518:313530331353033135677375Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative transcriptional regulator1e-0961.6
NC_010320:1268355:131352813135281313902375Thermoanaerobacter sp. X514 chromosome, complete genomeregulatory protein ArsR2e-0961.2
NC_014538:1598106:160048016004801600854375Thermoanaerobacter sp. X513 chromosome, complete genomeArsR family transcriptional regulator2e-0961.2
NC_016627:4323370:432693843269384327312375Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator2e-0960.8
NC_013171:1506500:151544715154471515749303Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, ArsR family7e-0959.3
NC_007907:960104:100435610043561004730375Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0858.9
NC_004113:1026886:104411310441131044508396Thermosynechococcus elongatus BP-1, complete genometranscriptional repressor SmtB homolog3e-0857
NC_015565:1163148:118595811859581186317360Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeArsR family transcriptional regulator4e-0857
NC_010723:371741:372447372447372812366Clostridium botulinum E3 str. Alaska E43, complete genomecadmium efflux system accessory protein8e-0855.8
NC_008262:2498000:251577325157732516132360Clostridium perfringens SM101, complete genometranscription repressor smtb-like protein PAB06251e-0755.5
NC_015671:3093596:310706831070683107427360Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein ArsR2e-0754.7
NC_014614:656000:674961674961675320360Clostridium sticklandii, complete genometranscriptional regulator, ArsR family2e-0754.3
NC_014377:1400544:141702714170271417401375Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family2e-0754.3
NC_010674:370629:377104377104377469366Clostridium botulinum B str. Eklund 17B, complete genomecadmium efflux system accessory protein2e-0754.3
NC_009089:370555:373980373980374345366Clostridium difficile 630, complete genomeArsR-family transcriptional regulator3e-0753.9
NC_013316:371953:375379375379375744366Clostridium difficile R20291, complete genomeArsR-family transcriptional regulator3e-0753.9
NC_007681:121150:134798134798135172375Methanosphaera stadtmanae DSM 3091, complete genomepredicted transcriptional regulator3e-0753.9
NC_014152:421481:451982451982452347366Thermincola sp. JR, complete genometranscriptional regulator, ArsR family4e-0753.5
NC_014976:170683:196266196266196589324Bacillus subtilis BSn5 chromosome, complete genomeArsR-SmtB repressors family transcriptional regulator6e-0753.1
NC_008726:3947917:396294739629473963306360Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR5e-0753.1
NC_002939:2315402:236638823663882366762375Geobacter sulfurreducens PCA, complete genometranscriptional regulator, ArsR family7e-0752.8
NC_002939:2337402:236638823663882366762375Geobacter sulfurreducens PCA, complete genometranscriptional regulator, ArsR family7e-0752.8
NC_007907:5185510:525847652584765258850375Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0752.8
UCMB5137:1594000:161395216139521614284333Bacillus atrophaeus UCMB-5137YozA9e-0752.4
NC_016024:1185388:120264112026411202991351Candidatus Chloracidobacterium thermophilum B chromosome chromosomeArsR family transcriptional regulator2e-0651.2
NC_013205:1123280:117567911756791176059381Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, ArsR family3e-0650.4
NC_014328:180482:183193183193183558366Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator9e-0648.9