Pre_GI: BLASTP Hits

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Query: NC_011770:2690501:2703995 Pseudomonas aeruginosa LESB58, complete genome

Start: 2703995, End: 2704459, Length: 465

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:3771861:377931137793113779748438Azotobacter vinelandii DJ, complete genomehypothetical protein2e-45180
NC_021150:3771860:377931037793103779747438Azotobacter vinelandii CA6, complete genomehypothetical protein2e-45180
NC_015410:2351464:237516823751682375647480Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-41166
NC_017047:1906000:190835419083541908860507Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-26118
NC_009436:2776410:281730628173062817776471Enterobacter sp. 638, complete genomehypothetical protein9e-26115
NC_017060:59500:101741101741102247507Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein2e-25114
NC_015968:3301958:331156433115643312034471Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein6e-25112
NC_015062:99969:102945102945103451507Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein5e-24109
NC_015566:3659318:366151836615183661991474Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-2199.8
NC_020418:2910593:291417029141702914634465Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-2096.7
NC_009655:1357486:137001413700141370457444Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein7e-1476.3
NC_016513:1400899:141188114118811412324444Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completehypothetical protein5e-1373.6
NC_016809:389561:393367393367393810444Haemophilus influenzae 10810, complete genomehypothetical protein6e-1373.2
NC_013282:1804909:181609018160901816626537Cronobacter turicensis, complete genomehypothetical protein3e-1167.4
NC_009783:1956000:195777519577751958227453Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein7e-0856.2
NC_016816:2953530:297338029733802973970591Pantoea ananatis LMG 5342, complete genomephage protein3e-0754.3
NC_011742:4962008:496146049614604962011552Escherichia coli S88 chromosome, complete genomenucleic acid-binding protein; e14 prophage4e-0753.9
NC_008563:5011997:501144950114495012000552Escherichia coli APEC O1, complete genomehypothetical protein4e-0753.9
NC_011740:4520373:451971145197114520376666Escherichia fergusonii ATCC 35469, complete genomeputative nucleic acid-binding protein; e14 prophage6e-0753.1
NC_014838:218000:231400231400231936537Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein1e-0652.4
NC_007946:2931364:293411729341172934680564Escherichia coli UTI89, complete genomehypothetical protein YmfL1e-0652
NC_008563:2946391:294914429491442949707564Escherichia coli APEC O1, complete genomee14 prophage; predicted DNA-binding transcriptional regulator1e-0652
NC_011742:2863316:286645528664552867018564Escherichia coli S88 chromosome, complete genomenucleic acid-binding protein; e14 prophage1e-0652
NC_004431:3040953:305834630583463058954609Escherichia coli CFT073, complete genomeHypothetical protein ymfL5e-0650.1
NC_000913:1188999:120247912024791203048570Escherichia coli K12, complete genomee14 prophage; predicted DNA-binding transcriptional regulator6e-0649.7
AC_000091:1191353:120483312048331205402570Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-0649.7