Pre_GI: BLASTP Hits

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Query: NC_011770:1431740:1431740 Pseudomonas aeruginosa LESB58, complete genome

Start: 1431740, End: 1432774, Length: 1035

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:5397526:5401977540197754030021026Hahella chejuensis KCTC 2396, complete genomeTetrahydrodipicolinate N-succinyltransferase1e-120432
NC_011184:597496:6170276170276180581032Vibrio fischeri MJ11 chromosome I, complete sequence2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase1e-111403
NC_016512:679688:686624686624687586963Propionibacterium acnes TypeIA2 P.acn17 chromosome, complete2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase4e-63242
NC_016511:678582:687239687239688201963Propionibacterium acnes TypeIA2 P.acn31 chromosome, complete2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase4e-63242
NC_014039:708427:713945713945714907963Propionibacterium acnes SK137 chromosome, complete genome2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase4e-63242
NC_013093:832971:853292853292854266975Actinosynnema mirum DSM 43827, complete genome2,3,4,5-tetrahydropyridine-2-carboxylateN-succin yltransferase1e-58227
NC_017187:1305805:1327880132788013290671188Arcobacter butzleri ED-1, complete genome2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase4e-40165
NC_017192:1841987:1844720184472018459071188Arcobacter sp. L, complete genome2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD6e-40165
NC_014935:1834569:1851888185188818530811194Nitratifractor saLSUginis DSM 16511 chromosome, complete genome2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase6e-38158