Pre_GI: BLASTP Hits

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Query: NC_011769:820521:843362 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 843362, End: 844423, Length: 1062

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013520:1559000:1563659156365915647051047Veillonella parvula DSM 2008, complete genomesecretion protein HlyD family protein3e-1686.3
NC_010655:1606901:1647982164798216490041023Akkermansia muciniphila ATCC BAA-835, complete genomesecretion protein HlyD family protein2e-1480.5
NC_014315:1435243:1454424145442414554401017Nitrosococcus watsoni C-113 chromosome, complete genomeHlyD family secretion protein2e-1480.1
NC_017098:1149145:1151963115196311529971035Spirochaeta africana DSM 8902 chromosome, complete genomemultidrug resistance efflux pump4e-1479.3
NC_013960:2761353:278221127822112783191981Nitrosococcus halophilus Nc4 chromosome, complete genomesecretion protein HlyD family protein4e-1479.3
NC_016629:415711:4324784324784335301053Desulfovibrio africanus str. Walvis Bay chromosome, completesecretion protein HlyD family protein2e-1377.4
NC_009253:3317533:3321619332161933226801062Desulfotomaculum reducens MI-1 chromosome, complete genomesecretion protein HlyD family protein7e-1375.1
NC_015850:1060000:1078648107864810796821035Acidithiobacillus caldus SM-1 chromosome, complete genomesecretion protein HlyD family protein2e-1273.6
NC_015224:1641819:164181916418191642805987Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-1273.6
NC_011296:102650:1225931225931237531161Thermodesulfovibrio yellowstonii DSM 11347, complete genomeefflux transporter, RND family, MFP subunit2e-1170.5
NC_015942:2213710:2213710221371022147441035Acidithiobacillus ferrivorans SS3 chromosome, complete genomesecretion protein HlyD family protein2e-1170.1
NC_015589:1523203:1539828153982815410151188Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRND family efflux transporter MFP subunit4e-1169.3
NC_007614:1633332:1633332163333216344111080Nitrosospira multiformis ATCC 25196 chromosome 1, completeSecretion protein HlyD6e-1168.6
NC_005071:1643557:1671339167133916724151077Prochlorococcus marinus str. MIT 9313, complete genomeABC-transporter component2e-1067.4
NC_011027:858565:8762378762378775051269Chlorobaculum parvum NCIB 8327, complete genomeefflux transporter, RND family, MFP subunit2e-1066.6
NC_016830:2168523:2184559218455921857101152Pseudomonas fluorescens F113 chromosome, complete genomepyoverdine-specific efflux macA-like protein4e-1065.9
NC_007644:2452244:2475320247532024768491530Moorella thermoacetica ATCC 39073, complete genomeSecretion protein HlyD1e-0964.3
NC_020260:1111130:1118143111814311194171275Cronobacter sakazakii Sp291, complete genomesecretion protein, HlyD family5e-0962.4
NC_011769:3712497:3728452372845237297441293Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeefflux transporter, RND family, MFP subunit6e-0962
NC_009454:1577319:158027115802711581248978Pelotomaculum thermopropionicum SI, complete genomemembrane-fusion protein9e-0961.6
NC_009778:1070000:1076055107605510773291275Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0860.8
NC_019697:4108944:4115472411547241168661395Chamaesiphon minutus PCC 6605, complete genomemultidrug resistance efflux pump2e-0860.5
NC_014622:2477019:2499763249976325012231461Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein2e-0860.1
NC_014844:1270618:1283356128335612851251770Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0859.7
NC_010278:1989500:1997995199799519991581164Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein4e-0859.3
NC_010939:2085000:2093467209346720946211155Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeprobable macrolide-specific efflux protein4e-0859.3
NC_004663:1499145:1509808150980815110371230Bacteroides thetaiotaomicron VPI-5482, complete genomeperiplasmic component of efflux system6e-0858.5
NC_016776:2237404:2248295224829522495181224Bacteroides fragilis 638R, complete genomeputative HlyD family secretion protein1e-0758.2
NC_006347:2190000:2199605219960522008281224Bacteroides fragilis YCH46, complete genomeperiplasmic component of efflux system1e-0758.2
NC_003228:2245181:2255859225585922570821224Bacteroides fragilis NCTC 9343, complete genomeputative HlyD family secretion protein1e-0758.2
NC_011884:2817054:2847334284733428485331200Cyanothece sp. PCC 7425, complete genomeABC exporter membrane fusion protein, DevB family1e-0757.8
NC_014910:2930860:2947313294731329483531041Alicycliphilus denitrificans BC chromosome, complete genomesecretion protein hlyd family protein3e-0756.6
NC_019757:5852000:5852005585200558533601356Cylindrospermum stagnale PCC 7417, complete genomeRND family efflux transporter, MFP subunit2e-0653.9
NC_005085:786851:7883967883967895441149Chromobacterium violaceum ATCC 12472, complete genomemultidrug resistance secretion protein2e-0653.5
NC_018870:2316499:2381159238115923823581200Thermacetogenium phaeum DSM 12270 chromosome, complete genomeRND-like efflux transporter2e-0653.5
NC_011296:102650:1202461202461213401095Thermodesulfovibrio yellowstonii DSM 11347, complete genomemultidrug resistance protein A3e-0653.1
NC_014394:2228470:2244665224466522458191155Gallionella capsiferriformans ES-2 chromosome, complete genomeefflux transporter, RND family, MFP subunit3e-0653.1
NC_016776:625628:6438716438716449711101Bacteroides fragilis 638R, complete genomeputative transport/efflux component protein3e-0652.8
NC_006347:625328:6404066404066415061101Bacteroides fragilis YCH46, complete genomemembrane fusion efflux protein3e-0652.8
NC_015589:1468774:1481742148174214828481107Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesecretion protein HlyD family protein5e-0652.4
NC_010296:2200054:2204725220472522059451221Microcystis aeruginosa NIES-843, complete genomehypothetical protein5e-0652.4
NC_015731:2400526:2410061241006124124842424Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein4e-0652.4
NC_004431:324000:3395113395113407731263Escherichia coli CFT073, complete genomePutative membrane spanning export protein6e-0652
NC_014722:1:4704147041483211281Burkholderia rhizoxinica HKI 454, complete genomeMacrolide-specific efflux protein macA8e-0651.6
NC_011060:459615:4765624765624776441083Pelodictyon phaeoclathratiforme BU-1, complete genomeefflux transporter, RND family, MFP subunit8e-0651.6
NC_010515:2449143:2451191245119124523841194Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceefflux transporter, RND family, MFP subunit9e-0651.6