Pre_GI: BLASTP Hits

Some Help

Query: NC_011601:1039500:1056679 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 1056679, End: 1056849, Length: 171

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:975353:993220993220993432213Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNinF protein1e-23108
NC_017328:303987:322559322559322729171Shigella flexneri 2002017 chromosome, complete genomeGp642e-23107
NC_013364:2645438:264657426465742646744171Escherichia coli O111:H- str. 11128, complete genomeputative NinF protein5e-23106
NC_008258:269806:293591293591293821231Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-21100
NC_009800:289000:306457306457306633177Escherichia coli HS, complete genomehypothetical protein3e-21100
NC_006511:2501500:251135125113512511527177Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-21100
NC_011147:2496808:250688725068872507063177Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-21100
NC_016860:364981:384481384481384657177Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-2199.4
NC_011740:2072173:210463921046392104818180Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin4e-2096.7
NC_011083:374000:390698390698390874177Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-2096.3
NC_011601:717072:735687735687735866180Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinF3e-1373.9
NC_011205:609464:632963632963633139177Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-0650.1