Pre_GI: BLASTP Hits

Some Help

Query: NC_011369:4395773:4399503 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 4399503, End: 4400363, Length: 861

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014836:2723060:273639127363912737182792Desulfurispirillum indicum S5 chromosome, complete genometype 11 methyltransferase2e-32139
NC_010814:3621215:362852836285283629277750Geobacter lovleyi SZ, complete genomeMethyltransferase type 113e-32139
NC_007759:2315490:231890023189002319685786Syntrophus aciditrophicus SB, complete genomeSAM-dependent methyltransferase2e-31136
NC_015572:1252000:128838412883841289139756Methylomonas methanica MC09 chromosome, complete genometype 11 methyltransferase2e-24113
NC_015574:391869:407421407421408158738Methanobacterium sp. SWAN-1 chromosome, complete genometype 11 methyltransferase2e-1996.3
NC_014221:3175013:318129831812983182047750Truepera radiovictrix DSM 17093 chromosome, complete genomeMethyltransferase type 112e-1686.3
NC_007759:2146254:215537421553742156369996Syntrophus aciditrophicus SB, complete genomemethyltransferase2e-1582.8
NC_014623:5181000:519824051982405198983744Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemethyltransferase type 11 domain-containing protein2e-1479.7
NC_009615:3993187:400179340017934002590798Parabacteroides distasonis ATCC 8503 chromosome, complete genomemethyltransferase4e-1479
NC_019977:2141677:2145985214598521479521968Methanomethylovorans hollandica DSM 15978, complete genomeATP-grasp enzyme, D-alanine-D-alanine ligase5e-1478.6
NC_015680:691457:709588709588710331744Pyrococcus yayanosii CH1 chromosome, complete genomeSAM-dependent methyltransferase1e-1377.4
NC_019974:1115553:117843011784301179047618Natronococcus occultus SP4, complete genomeTellurite resistance protein TehB8e-1271.2
NC_014831:388007:3936463936463950761431Thermaerobacter marianensis DSM 12885 chromosome, complete genomeMethyltransferase type 115e-1168.6
NC_014624:2996377:300986630098663010609744Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-1167.8
NC_015565:2408669:243275124327512433506756Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetype 11 methyltransferase1e-1067
NC_014307:2735934:273708227370822737810729Ralstonia solanacearum CFBP2957 chromosome, complete genomen,N-dimethyltransferase2e-1066.6
NC_014829:4346500:434770743477074348483777Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeMethyltransferase type 123e-1066.2
NC_002967:2507993:252328125232812524042762Treponema denticola ATCC 35405, complete genomehypothetical protein4e-1065.9
NC_009921:1813500:182733118273311828086756Frankia sp. EAN1pec, complete genomeMethyltransferase type 115e-1065.5
NC_012526:520947:544638544638545390753Deinococcus deserti VCD115, complete genomeputative methyltransferase8e-1064.3
NC_014836:1052214:106436810643681065174807Desulfurispirillum indicum S5 chromosome, complete genometype 11 methyltransferase2e-0963.5
NC_015500:78223:954339543396149717Treponema brennaborense DSM 12168 chromosome, complete genomeMethyltransferase type 113e-0962.8
NC_013406:5020690:504140050414005042164765Paenibacillus sp. Y412MC10 chromosome, complete genometype 12 methyltransferase3e-0962.8
NC_010718:2265447:229465222946522295404753Natranaerobius thermophilus JW/NM-WN-LF, complete genomeMethyltransferase type 114e-0962.4
NC_009953:2727669:274997927499792750830852Salinispora arenicola CNS-205 chromosome, complete genometype 11 methyltransferase3e-0962.4
NC_009953:2342500:234302023430202343748729Salinispora arenicola CNS-205 chromosome, complete genometype 12 methyltransferase3e-0962.4
NC_008209:695269:711927711927712547621Roseobacter denitrificans OCh 114, complete genome3-demethylubiquinone-9 3-methyltransferase9e-0960.8
NC_015556:1899850:190198619019861902729744Pseudomonas fulva 12-X chromosome, complete genomeMethyltransferase type 111e-0860.8
NC_009439:3485000:350161635016163502359744Pseudomonas mendocina ymp, complete genomemethyltransferase type 122e-0860.1
NC_014829:722000:722048722048722800753Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeMethyltransferase type 112e-0859.7
NC_009654:1729159:174743917474391748182744Marinomonas sp. MWYL1, complete genomemethyltransferase type 113e-0859.3
NC_014507:245344:263605263605264447843Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase4e-0858.9
NC_003272:3148687:315607231560723156950879Nostoc sp. PCC 7120, complete genomehypothetical protein4e-0858.9
NC_014655:130636:138624138624139349726Leadbetterella byssophila DSM 17132 chromosome, complete genomemethyltransferase type 124e-0858.9
NC_007355:544796:558905558905559684780Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceubiquinone/menaquinone biosynthesis methyltransferase5e-0858.5
NC_015732:30472:453994539946151753Spirochaeta caldaria DSM 7334 chromosome, complete genometype 11 methyltransferase7e-0858.2
NC_010546:981363:9824309824309836351206Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein9e-0857.8
NC_015953:6212366:623131462313146232063750Streptomyces sp. SirexAA-E chromosome, complete genometype 11 methyltransferase1e-0757.4
NC_013406:5020690:502836750283675029146780Paenibacillus sp. Y412MC10 chromosome, complete genometype 11 methyltransferase1e-0757
NC_015703:3325780:334282033428203343596777Runella slithyformis DSM 19594 chromosome, complete genometype 12 methyltransferase1e-0757
NC_018691:359695:371812371812372267456Alcanivorax dieselolei B5 chromosome, complete genomeMethyltransferase domain family2e-0756.6
NC_014666:4419693:444117944411794441922744Frankia sp. EuI1c chromosome, complete genomeMethyltransferase type 113e-0756.2
NC_014622:5683400:568701356870135687777765Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein4e-0755.8
NC_015680:1475917:149444214944421495170729Pyrococcus yayanosii CH1 chromosome, complete genomesterol biosynthesis methyltransferase-like protein4e-0755.8
NC_009698:3211131:321945832194583220198741Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein4e-0755.5
NC_009697:3316000:332235133223513323091741Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein4e-0755.5
NC_009495:3340000:334636233463623347102741Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein4e-0755.5
NC_012880:3645304:365042336504233651244822Dickeya dadantii Ech703, complete genomeMethyltransferase type 115e-0755.1
NC_009348:2362163:236430923643092365085777Aeromonas salmonicida subsp. salmonicida A449, complete genomeS-adenosylmethionine-dependentmethyltransferase7e-0754.7
NC_009922:2487492:249286324928632493618756Alkaliphilus oremlandii OhILAs, complete genomeMethyltransferase type 127e-0754.7
NC_012563:3580000:358831435883143589054741Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein9e-0754.3
NC_016894:2809125:282244528224452823188744Acetobacterium woodii DSM 1030 chromosome, complete genomemethyltransferase1e-0653.5
NC_006624:2016000:203209420320942032780687Thermococcus kodakarensis KOD1, complete genomeSAM-dependent methyltransferase, UbiE/COQ5 family2e-0653.5
NC_002932:1851070:185495018549501855648699Chlorobium tepidum TLS, complete genomeMg-protoporphyrin IX methyl transferase2e-0653.5
NC_015416:1542202:155808115580811558869789Methanosaeta concilii GP-6 chromosome, complete genomemethyltransferase2e-0653.1
NC_016935:1868839:190555019055501906284735Paenibacillus mucilaginosus 3016 chromosome, complete genometype 11 methyltransferase3e-0652.8
NC_006513:2526843:253340825334082534244837Azoarcus sp. EbN1, complete genomeprobable methyltransferase3e-0652.8
NC_003552:4782635:480040848004084801163756Methanosarcina acetivorans C2A, complete genomeubiE/COQ5 methyltransferase3e-0652.8
NC_019940:2236630:224885222488522249622771Thioflavicoccus mobilis 8321 chromosome, complete genomemethylase3e-0652.4
NC_013929:1799594:182314718231471823800654Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-0652.4
NC_013131:7945280:795036479503647951128765Catenulispora acidiphila DSM 44928, complete genomeMethyltransferase type 125e-0652
NC_009051:2240480:224762622476262248216591Methanoculleus marisnigri JR1, complete genomeMethyltransferase type 115e-0652
NC_011901:2739984:274686327468632747651789Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein8e-0651.2
NC_013854:1686997:168921016892101689974765Azospirillum sp. B510, complete genomeubiquinone/menaquinone biosynthesis methyltransferase ubi8e-0651.2