Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1184088 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1184088, End: 1184639, Length: 552

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011000:2732330:275831927583192758915597Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transport permease3e-0961.2
NC_011146:2485625:250398125039812504583603Geobacter bemidjiensis Bem, complete genomephosphoesterase PA-phosphatase related2e-0858.5
NC_015136:912276:925323925323925925603Burkholderia sp. CCGE1001 chromosome 1, complete sequencephosphoesterase PA-phosphatase-like protein1e-0756.2
NC_014019:2711500:271549627154962716011516Bacillus megaterium QM B1551 chromosome, complete genomePAP2 family protein2e-0755.5
NC_007952:3283394:330495233049523305554603Burkholderia xenovorans LB400 chromosome 2, complete sequenceMembrane-associated phospholipid phosphatase2e-0755.5
NC_007973:3240866:325787532578753258471597Ralstonia metallidurans CH34 chromosome 1, complete sequencephosphoesterase, PA-phosphatase related2e-0652.4
NC_015562:785959:8025788025788035941017Methanotorris igneus Kol 5 chromosome, complete genomephosphoesterase PA-phosphatase-like protein2e-0651.6
NC_011083:967260:984841984841985449609Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative undecaprenyl-diphosphatase YbjG7e-0650.4
NC_010102:2178594:218013921801392180747609Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0650.4
NC_011205:944125:961710961710962318609Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853undecaprenyl pyrophosphate phosphatase7e-0650.4
NC_003197:920000:937574937574938182609Salmonella typhimurium LT2, complete genomeputative permease6e-0650.4
NC_016810:919266:936835936835937443609Salmonella enterica subsp. enterica serovar Typhimurium strputative permease6e-0650.4
NC_016831:2108557:211010221101022110710609Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative permease6e-0650.4
NC_016856:921057:938626938626939234609Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sundecaprenyl pyrophosphate phosphatase6e-0650.4
NC_016863:920346:937915937915938523609Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1undecaprenyl pyrophosphate phosphatase6e-0650.4
NC_011294:878896:896466896466897074609Salmonella enterica subsp. enterica serovar Enteritidis strundecaprenyl pyrophosphate phosphatase6e-0650.4
NC_012125:894955:912525912525913199675Salmonella enterica subsp. enterica serovar Paratyphi C strainUDP pyrophosphate phosphatase8e-0650.1
NC_011094:973140:990704990704991378675Salmonella enterica subsp. enterica serovar Schwarzengrund strUDP pyrophosphate phosphatase8e-0650.1
NC_016857:919266:936835936835937509675Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative undecaprenyl-diphosphatase YbjG8e-0650.1
NC_016860:959609:977178977178977852675Salmonella enterica subsp. enterica serovar Typhimurium strundecaprenyl pyrophosphate phosphatase8e-0650.1
NC_017046:919249:936817936817937491675Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease8e-0650.1
NC_015061:2770856:278842927884292789034606Rahnella sp. Y9602 chromosome, complete genomeUndecaprenyl-diphosphatase7e-0650.1
NC_006905:946418:965321965321965995675Salmonella enterica subsp. enterica serovar Choleraesuis strputative permease7e-0650.1
NC_011080:924326:941908941908942582675Salmonella enterica subsp. enterica serovar Newport str. SL254,putative undecaprenyl-diphosphatase YbjG8e-0650.1