Pre_GI: BLASTP Hits

Some Help

Query: NC_011205:609464:631320 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 631320, End: 631778, Length: 459

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:1177946:119458811945881195046459Escherichia coli S88 chromosome, complete genomerecombination protein ninB from phage origin3e-82303
NC_011751:1405381:142258614225861423044459Escherichia coli UMN026 chromosome, complete genomerecombination protein ninB from phage origin2e-81300
NC_007946:1239278:125369712536971254137441Escherichia coli UTI89, complete genomeputative NinB protein encoded within prophage1e-79294
NC_009800:289000:305342305342305782441Escherichia coli HS, complete genomeputative ninB protein1e-79294
NC_004431:1401681:141716214171621417602441Escherichia coli CFT073, complete genomeUnknown protein encoded within prophage1e-79294
NC_008563:1175035:119108411910841191524441Escherichia coli APEC O1, complete genomehypothetical protein1e-79294
NC_013941:975353:992646992646993086441Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-79294
NC_017328:303987:321809321809322249441Shigella flexneri 2002017 chromosome, complete genomeProtein ninB1e-79294
NC_011601:717072:735071735071735511441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB2e-79293
NC_011601:2614691:261575026157502616190441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB6e-79292
NC_012759:4132527:414624541462454146685441Escherichia coli BW2952 chromosome, complete genomeProtein ninB6e-79292
NC_007946:2625461:262598426259842626424441Escherichia coli UTI89, complete genomehypothetical protein5e-79292
NC_016860:364981:383394383394383831438Salmonella enterica subsp. enterica serovar Typhimurium strrecombination protein ninB from phage origin7e-78288
NC_014306:3524980:356371235637123564143432Erwinia billingiae Eb661, complete genomephage NinB protein1e-38157
NC_008570:2216736:224629022462902246730441Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeNinB protein3e-35147
NC_015663:4767443:477606547760654776514450Enterobacter aerogenes KCTC 2190 chromosome, complete genomeNinB family protein1e-24112
NC_015663:4522109:453126145312614531710450Enterobacter aerogenes KCTC 2190 chromosome, complete genomeNinB family protein8e-24108
NC_013364:1183000:119837811983781198911534Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-23107
NC_013361:1558423:157471215747121575245534Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-23107
NC_013361:3112023:312648431264843126930447Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-23106
NC_011601:1039500:105553310555331055979447Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeprotein NinB1e-22105
NC_013364:2645438:264744426474442647890447Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-22105
NC_002655:1332961:134720813472081347654447Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W1e-22105
NC_011147:2496808:250771325077132508159447Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-22103
NC_006511:2501500:251217725121772512623447Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-22103
NC_013008:3231414:323272432327243233140417Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeNinB protein9e-22102
NC_014121:3627588:366413436641343664544411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative ninB protein7e-1889.4
NC_011740:2072173:210537121053712105787417Escherichia fergusonii ATCC 35469, complete genomeputative ninB protein1e-1789
NC_013361:3287671:329048132904813290891411Escherichia coli O26:H11 str. 11368 chromosome, complete genomerecombination protein2e-1787.8
NC_009778:2993218:301049330104933010903411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1786.7
NC_013282:1200993:122082112208211221231411Cronobacter turicensis, complete genomehypothetical protein1e-1582.4
NC_009567:904922:908461908461908877417Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein6e-1476.3
NC_014922:825396:845110845110845526417Haemophilus influenzae F3047 chromosome, complete genomerecombination protein NinB6e-1476.3
NC_002927:2338549:234788923478892348296408Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1272
NC_011283:4212000:421354542135454214012468Klebsiella pneumoniae 342 chromosome, complete genomeninB protein2e-1271.2
NC_007712:1219957:124413012441301244570441Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0858.5
NC_007712:3382000:338707633870763387489414Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-0857
NC_007712:1893066:190422519042251904638414Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-0857
NC_007712:1516589:153669315366931537130438Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-0856.2
NC_007712:2028500:207215420721542072591438Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-0856.2
NC_010682:2422500:243107024310702431495426Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein3e-0650.8