Pre_GI: BLASTP Hits

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Query: NC_011205:2180598:2181574 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2181574, End: 2182401, Length: 828

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2764550:276757827675782768405828Citrobacter rodentium ICC168, complete genomehypothetical protein2e-141501
NC_012731:2083650:209423120942312095058828Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-110399
NC_020181:5130513:516482251648225165622801Enterobacter aerogenes EA1509E, complete genomeFIG00733087: hypothetical protein2e-104378
NC_015566:3659318:366467036646703665491822Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-89329
NC_013361:3651150:365180936518093652633825Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-82305
NC_008563:2946391:295231629523162953140825Escherichia coli APEC O1, complete genomehypothetical protein2e-78291
NC_007946:2931364:293728929372892938113825Escherichia coli UTI89, complete genomehypothetical protein YfdQ2e-78291
NC_004431:3040953:306148330614833062307825Escherichia coli CFT073, complete genomeHypothetical protein yfdQ2e-78291
NC_011750:5045927:505708450570845057908825Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-78291
NC_011742:2863316:286962728696272870451825Escherichia coli S88 chromosome, complete genomehypothetical protein2e-78291
NC_010473:2548946:256381925638192564643825Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; predicted protein5e-78290
AC_000091:2462461:247947824794782480302825Escherichia coli W3110 DNA, complete genomehypothetical protein5e-78290
NC_000913:2455037:247205424720542472878825Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; predicted protein5e-78290
NC_012759:2342986:235785923578592358683825Escherichia coli BW2952 chromosome, complete genomeCPS-53 (KpLE1) prophage protein5e-78290
NC_013353:2911741:291350329135032914324822Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-75282
AP010958:2911741:291350329135032914324822Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-75282
NC_017506:2089769:210019521001952101061867Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-43175
NC_017986:4885979:489686148968614897676816Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-40164