Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1379733 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1379733, End: 1380032, Length: 300

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:1906000:192734019273401927615276Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-2199.8
NC_016612:3314846:334620833462083346501294Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-2199.4
NC_011742:4962008:498115949811594981434276Escherichia coli S88 chromosome, complete genomehypothetical protein6e-1682.8
NC_011740:4520373:453862745386274538902276Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from putative prophage6e-1682.8
NC_008563:5011997:503114950311495031424276Escherichia coli APEC O1, complete genomehypothetical protein6e-1682.8
NC_011748:1773642:177337417733741773649276Escherichia coli 55989, complete genomeconserved hypothetical protein from putative prophage8e-1682.4
CU928145:1773642:177337417733741773649276Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein from putative prophage8e-1682.4
NC_014121:1682638:171969617196961719938243Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1375.5
NC_017060:59500:841468414684349204Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein3e-1270.5
NC_013364:3339768:334364633436463343927282Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-1065.1
NC_013353:1472506:147493714749371475218282Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-1064.3
NC_013008:2889743:290619929061992906480282Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1064.3
NC_002655:2730659:275969527596952759976282Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U2e-1064.3
NC_002695:2893951:291040629104062910687282Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1064.3
AP010958:1472506:147493714749371475218282Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-1064.3
NC_013008:1761165:176507617650761765324249Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-0754.3
NC_011353:2892265:290590529059052906153249Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-0754.3
NC_011353:1761977:176610017661001766348249Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-0754.3