Pre_GI: BLASTP Hits

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Query: NC_011149:1429523:1436007 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1436007, End: 1436168, Length: 162

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1336894:134330413433041343540237Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein4e-24110
NC_004631:1623511:163764216376421637878237Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein4e-24110
NC_006905:1766000:178009617800961780350255Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein5e-24109
NC_006511:1273162:127957012795701279806237Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative lipoprotein1e-23108
NC_011147:1267005:127341312734131273649237Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein1e-23108
NC_003197:1753663:176696717669671767221255Salmonella typhimurium LT2, complete genomeputative outer membrane lipoprotein1e-23108
NC_016810:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein1e-23108
NC_016857:1709695:172382117238211724075255Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane lipoprotein1e-23108
NC_016863:1711832:172513717251371725391255Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane lipoprotein1e-23108
NC_016856:1763640:177694517769451777181237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane lipoprotein8e-24108
NC_016860:1752000:176465817646581764894237Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane lipoprotein8e-24108
NC_011080:1750000:176332017633201763481162Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane lipoprotein2e-23107
NC_017046:1709578:172370417237041723865162Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein3e-23106
NC_011094:1726000:174014017401401740376237Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-2098.2