Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1248905 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1248905, End: 1249069, Length: 165

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1923870:192957519295751929739165Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-22102
NC_003197:1945858:195156319515631951727165Salmonella typhimurium LT2, complete genomeputative inner membrane protein4e-1683.2
NC_011083:1993672:199937119993711999535165Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein4e-1683.2
NC_011080:1944226:194993119499311950095165Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein4e-1683.2
NC_011205:1391971:141597714159771416141165Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inner membrane protein4e-1683.2
NC_016810:1903426:190913119091311909295165Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1683.2
NC_016831:1690811:169651016965101696674165Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1683.2
NC_016856:1957263:196296819629681963132165Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein4e-1683.2
NC_016857:1903426:190913119091311909295165Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein4e-1683.2
NC_016860:1943203:194890819489081949072165Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1683.2
NC_016863:1905454:191115919111591911323165Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein4e-1683.2
NC_017046:1902788:190849319084931908657165Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1683.2
NC_016832:1090274:110677911067791106943165Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-1682.8
NC_006905:1961774:196751319675131967677165Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein6e-1682.8
NC_003198:1867456:187316118731611873325165Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-1682.8
NC_004631:1091303:110780711078071107971165Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-1682.8