Pre_GI: BLASTP Hits

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Query: NC_011094:688626:688626 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 688626, End: 689144, Length: 519

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:1867456:188947118894711889989519Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage tail protein2e-86317
NC_011080:1166951:117352511735251174052528Salmonella enterica subsp. enterica serovar Newport str. SL254,caudovirales tail fibre assembly protein2e-84311
NC_006905:1342474:134886413488641349382519Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical prophage protein3e-82303
NC_011294:1006630:101734210173421017557216Salmonella enterica subsp. enterica serovar Enteritidis str1e-1995.9
NC_011740:621408:625989625989626549561Escherichia fergusonii ATCC 35469, complete genomehypothetical protein from phage origin6e-1890.1
NC_007613:1353500:137222913722291372762534Shigella boydii Sb227, complete genomeputative tail fiber assembly protein9e-1372.8
NC_020064:871338:887210887210887809600Serratia marcescens FGI94, complete genomeCaudovirales tail fiber assembly protein1e-1066.2
NC_007712:1182518:119294511929451193556612Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1065.9
NC_007613:1353500:137279113727911373354564Shigella boydii Sb227, complete genomeputative tail fiber assembly protein3e-1064.3
NC_012751:899394:915111915111915647537Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail assembly chaperone4e-1063.9
NC_020181:5130513:517271251727125173329618Enterobacter aerogenes EA1509E, complete genomephage tail assembly chaperone gp385e-0960.5
NC_014306:103545:131102131102131692591Erwinia billingiae Eb661, complete genomePhage tail assembly chaperone gp383e-0857.8
NC_014500:177824:193070193070193465396Dickeya dadantii 3937 chromosome, complete genomeputative tail fiber assembly protein5e-0857
NC_013508:2587913:259568325956832596264582Edwardsiella tarda EIB202, complete genomephage tail assembly chaperone gp381e-0755.8
NC_011750:2928990:293870429387042939114411Escherichia coli IAI39 chromosome, complete genomeputative tail fiber assembly protein (possibly partial)2e-0755.5
NC_011205:2137696:214882021488202149389570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly protein2e-0755.5
NC_011294:2009388:202051320205132021082570Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein2e-0755.5
NC_016856:2085283:209563220956322096201570Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber assembly protein2e-0755.5
NC_016863:2029340:204382420438242044393570Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-0755.5
NC_017046:2026672:204115620411562041725570Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein2e-0755.5
NC_016810:2027311:204179520417952042394600Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein2e-0755.1
NC_011083:2375061:238241423824142382941528Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative phage tail fiber assembly protein4e-0754.3
NC_010102:683444:710448710448710975528Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0754.3
NC_003197:2327474:233483423348342335361528Salmonella typhimurium LT2, complete genomeputative phage tail fiber assembly protein4e-0754.3
NC_016810:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber assembly protein4e-0754.3
NC_016856:2379027:238638723863872386914528Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage tail fiber assembly protein4e-0754.3
NC_016857:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage tail fiber assembly protein4e-0754.3
NC_016860:2323017:233037723303772330904528Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-0754.3
NC_016863:2324293:233457923345792335106528Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage tail fiber assembly protein4e-0754.3
NC_017046:2324554:233191423319142332441528Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber assembly protein4e-0754.3
NC_011094:2115750:212749021274902128065576Salmonella enterica subsp. enterica serovar Schwarzengrund strtail fiber assembly protein4e-0754.3
NC_010102:931055:940063940063940638576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0753.5
NC_012967:786534:794897794897795295399Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-0651.6
NC_014562:1698253:172105917210591721649591Pantoea vagans C9-1 chromosome, complete genomeTail fiber assembly protein5e-0650.4