Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2121305 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2121305, End: 2123653, Length: 2349

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:1017301:1031568103156810339162349Salmonella bongori NCTC 12419, complete genometype III secretion system effector protein01265
NC_013716:1298932:1306960130696013093082349Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein EspX74e-70266
NC_002655:1655944:1663537166353716654861950Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933N1e-69265
NC_002695:1571389:1579163157916315815112349Escherichia coli O157:H7 str. Sakai, complete genomeputative secreted effector protein1e-69265
AP010958:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspX-homolog1e-69265
NC_011353:1513000:1520091152009115224392349Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-69265
NC_013353:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspX1e-69265
NC_013361:3597812:3611813361181336141612349Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspX1e-69265
NC_013364:1477248:1484185148418514865332349Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspX1e-69265
NC_013008:1513000:1520778152077815227271950Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector2e-69264