Pre_GI: BLASTP Hits

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Query: NC_011094:1923870:1936562 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1936562, End: 1937299, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1690811:170444717044471705361915Salmonella enterica subsp. enterica serovar Gallinarum/pulloruminner membrane protein (PagO)2e-138491
NC_011080:1944226:196451419645141965428915Salmonella enterica subsp. enterica serovar Newport str. SL254,protein PagO2e-138491
NC_006905:1961774:197604919760491976963915Salmonella enterica subsp. enterica serovar Choleraesuis strPhoPQ-activated gene; predicted integral membrane protein2e-138491
NC_010102:1137247:115928411592841160198915Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-138491
NC_011274:1299475:131955513195551320469915Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91inner membrane protein PagO2e-138491
NC_011294:1220526:125536712553671256281915Salmonella enterica subsp. enterica serovar Enteritidis strinner membrane protein PagO2e-138491
NC_012125:1897611:191576319157631916677915Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-138491
NC_003197:1945858:195950719595071960421915Salmonella typhimurium LT2, complete genomeintegral membrane protein3e-138490
NC_011083:1993672:200733120073312008245915Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein PagO3e-138490
NC_016810:1903426:191707519170751917989915Salmonella enterica subsp. enterica serovar Typhimurium strinner membrane protein (PagO)3e-138490
NC_016856:1957263:197091219709121971826915Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegral membrane protein3e-138490
NC_016857:1903426:191707519170751917989915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74integral membrane protein3e-138490
NC_016860:1943203:195685219568521957766915Salmonella enterica subsp. enterica serovar Typhimurium strprotein PagO3e-138490
NC_016863:1905454:191910319191031920017915Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1integral membrane protein3e-138490
NC_003198:1867456:188100418810041881918915Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-138489
NC_004631:1091303:109921410992141100128915Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-138489
NC_016832:1090274:109818510981851099099915Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative transporter8e-138489
NC_011147:1057259:107575710757571076671915Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-137486
NC_006511:1063249:108174710817471082661915Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-137486
NC_009832:2211154:224124422412442242188945Serratia proteamaculans 568, complete genomeprotein of unknown function DUF6 transmembrane1e-106385
NC_012731:3411161:344387134438713444785915Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative PhoPQ-activated integral membrane protein2e-95348
NC_006625:1:123381233813240903Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein1e-90332
NC_012751:275336:292403292403293290888Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeintegral membrane protein1e-78292
NC_016632:170000:172645172645173544900Serratia symbiotica str. 'Cinara cedri' chromosome, completeputative inner membrane protein9e-58223
NC_002516:2306776:231289923128992313789891Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-29128
NC_007493:1672163:171087117108711711836966Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencepossible transporter, DME family, DMT superfamily1e-0860.5
NC_017195:2027430:203142320314232032301879Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYoaV5e-0651.6
NC_014976:170683:170683170683171561879Bacillus subtilis BSn5 chromosome, complete genomecysteine and O-acetyl serine efflux permease5e-0651.6
NC_020244:2049753:205171920517192052534816Bacillus subtilis XF-1, complete genomecysteine and O-acetyl serine efflux permease9e-0650.8