Pre_GI: BLASTP Hits

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Query: NC_011092:76993:88835 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 88835, End: 89497, Length: 663

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1811000:185097218509721851616645Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein6e-60230
NC_014500:3097362:314698231469823147668687Dickeya dadantii 3937 chromosome, complete genomeVirB12e-59228
NC_004547:1873390:187717918771791877826648Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein2e-58225
NC_017047:2079368:208240520824052083052648Rahnella aquatilis HX2 chromosome, complete genometransglycosylase5e-58224
NC_012912:1701231:170809317080931708740648Dickeya zeae Ech1591, complete genomeLytic transglycosylase catalytic9e-58223
NC_016818:1795576:183300218330021833649648Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetransglycosylase3e-57221
NC_009792:859228:884053884053884763711Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-56218
NC_020181:473170:497996497996498706711Enterobacter aerogenes EA1509E, complete genomeBores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1)3e-56218
NC_013592:2968500:299751929975192998226708Dickeya dadantii Ech586, complete genomeLytic transglycosylase catalytic4e-56217
NC_016845:3448881:346834034683403469050711Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative type IV secretory pathway VirB1 component4e-56217
NC_012731:3411161:344922534492253449935711Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretory pathway VirB1 component9e-56216
NC_007275:1:200772007720790714Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeconjugal transfer protein2e-26119
NC_014914:127873:130277130277131008732Taylorella equigenitalis MCE9 chromosome, complete genomePeptidoglycan hydrolase VirB13e-25115
NC_011001:372185:379651379651380298648Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB12e-24112
NC_013716:4306695:438339243833924384003612Citrobacter rodentium ICC168, complete genome8e-24110
NC_008061:2106848:212099921209992121646648Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLytic transglycosylase, catalytic2e-23109
NC_008543:127675:148123148123148770648Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceLytic transglycosylase, catalytic2e-23109
NC_010515:1124298:113845111384511139098648Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLytic transglycosylase catalytic4e-23108
NC_016513:54802:598975989760610714Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeLytic transglycosyllase catalytic1e-22106
NC_010524:933191:937794937794938303510Leptothrix cholodnii SP-6, complete genomeLytic transglycosylase catalytic2e-21102
NC_010943:3034366:304672530467253047690966Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretion system conjugal protein3e-21101
NC_010676:2793237:279644827964482797095648Burkholderia phytofirmans PsJN chromosome 2, complete sequenceLytic transglycosylase catalytic6e-21100
NC_011071:2733438:274841727484172749400984Stenotrophomonas maltophilia R551-3, complete genomeLytic transglycosylase catalytic2e-2099.4
NC_015947:2752450:276677027667702767753984Burkholderia sp. JV3 chromosome, complete genomelytic transglycosylase8e-2097.1
NC_013722:2150882:216041421604142161301888Xanthomonas albilineans, complete genomeputative virb1 protein2e-1892.4
NC_017271:2935643:296739329673932968319927Xanthomonas campestris pv. raphani 756C chromosome, completeVirB1 protein6e-1890.9
NC_007086:1936505:196269619626961963529834Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB1 protein6e-1890.9
NC_003902:2933121:294669029466902947523834Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB1 protein6e-1890.9
NC_003919:3060484:308245230824523083294843Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB1 protein2e-1789.4
NC_010688:1908012:193542719354271936266840Xanthomonas campestris pv. campestris, complete genometype IV secretion system lytic murein transglycosylase component VirB12e-1789.4
NC_010170:3908500:391497339149733915638666Bordetella petrii, complete genometype IV secretion system protein VirB14e-1581.6
NC_013422:1732677:174860017486001749133534Halothiobacillus neapolitanus c2, complete genomeLytic transglycosylase catalytic5e-1580.9
NC_006371:1743982:176848617684861769013528Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical conjugal transfer protein1e-1480.1
NC_008781:2611702:263095426309542631538585Polaromonas naphthalenivorans CJ2, complete genomeLytic transglycosylase, catalytic2e-1479
NC_014923:5765660:578211757821175782890774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLytic transglycosylase catalytic8e-1477
NC_015675:6276357:633678863367886337561774Mesorhizobium opportunistum WSM2075 chromosome, complete genomelytic transglycosylase catalytic subunit8e-1477
NC_019973:5694620:571107757110775711850774Mesorhizobium australicum WSM2073, complete genometransglycosylase family protein8e-1477
NC_015942:1920693:192647019264701927042573Acidithiobacillus ferrivorans SS3 chromosome, complete genomelytic transglycosylase1e-1273.2
NC_015850:1220444:122563512256351226216582Acidithiobacillus caldus SM-1 chromosome, complete genomeIV secretion complex assembly protein2e-1065.9
NC_012440:1841315:186590018659001866409510Persephonella marina EX-H1, complete genomesoluble lytic murein transglycosylase9e-0857
NC_010606:25090:392353923539861627Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceSoluble lytic murein transglycosylase5e-0754.7