Pre_GI: BLASTP Hits

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Query: NC_010816:2326453:2338749 Bifidobacterium longum DJO10A, complete genome

Start: 2338749, End: 2339990, Length: 1242

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014638:1333976:1345578134557813468191242Bifidobacterium bifidum PRL2010 chromosome, complete genomerestriction endonuclease S subunit1e-115416
NC_014616:1296287:1306098130609813073361239Bifidobacterium bifidum S17 chromosome, complete genomeHsdS-like protein of Type I restriction-modification system6e-112404
NC_004307:2208591:2219603221960322208231221Bifidobacterium longum NCC2705, complete genomeHsdS specificity protein of type I restriction-modification system1e-65251
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit4e-65249
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain2e-59229
NC_020054:4161049:4178338417833841795761239Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, S subunit2e-59229
NC_015052:1771976:1781878178187817830351158Bifidobacterium longum subsp. infantis 157F, complete genomerestriction-modification system specificity subunit3e-57223
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit7e-57221
NC_007508:570000:5767025767025779611260Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)7e-55214
NC_014169:1784435:1795590179559017967861197Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit3e-54213
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit3e-49196
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit9e-49194
NC_007793:459045:4590454590454602561212Staphylococcus aureus subsp. aureus USA300, complete genomeputative restriction/modification system specificity protein2e-43176
NC_010079:458940:4589404589404601511212Staphylococcus aureus subsp. aureus USA300_TCH1516, completetype I site-specific deoxyribonuclease specificity subunit2e-43176
NC_002745:450000:4525494525494537601212Staphylococcus aureus subsp. aureus N315, complete genomeprobable restriction modification system specificity subunit2e-43176
NC_002758:475516:4770654770654782761212Staphylococcus aureus subsp. aureus Mu50, complete genomeprobable restriction modification system specificity subunit2e-43176
NC_009487:486000:4878104878104890211212Staphylococcus aureus subsp. aureus JH9 chromosome, completerestriction modification system DNA specificity subunit2e-43176
NC_009632:486331:4878804878804890911212Staphylococcus aureus subsp. aureus JH1 chromosome, completerestriction modification system DNA specificity subunit2e-43176
NC_009641:448640:4486404486404498511212Staphylococcus aureus subsp. aureus str. Newman chromosome,type I restriction modification system, site specificity determination subunit2e-43176
NC_013450:412122:4136714136714148821212Staphylococcus aureus subsp. aureus ED98, complete genometype I restriction-modification system S subunit2e-43176
NC_017341:472685:4726854726854738961212Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,restriction endonuclease S subunit2e-43176
NC_017343:416834:4168344168344180451212Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype I restriction modification DNA specificity domain protein2e-43176
NC_017347:469024:4690244690244702351212Staphylococcus aureus subsp. aureus T0131 chromosome, completeRestriction modification system DNA specificity domain protein2e-43176
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-39162
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB3e-39162
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit4e-35149
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain1e-33144
NC_014323:5219154:5228943522894352302081266Herbaspirillum seropedicae SmR1 chromosome, complete genomeType I site-specific deoxyribonuclease specificity subunit7e-33141
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit8e-33141
NC_015634:2595500:2612515261251526136931179Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein1e-31138
NC_014562:3985500:3997879399787939990151137Pantoea vagans C9-1 chromosome, complete genometype I restriction-modification system specificty subunit9e-31134
NC_015500:484984:5002385002385014611224Treponema brennaborense DSM 12168 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-30132
NC_014727:995480:1006396100639610075681173Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type-i specificity determinant subunit8e-29128
NC_010571:1334000:1344968134496813462811314Opitutus terrae PB90-1, complete genomerestriction modification system DNA specificity domain2e-28127
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-28126
NC_019904:5308998:5313727531372753149651239Echinicola vietnamensis DSM 17526 chromosome, complete genomerestriction endonuclease S subunit2e-28126
NC_013170:311045:352409352409353035627Cryptobacterium curtum DSM 15641, complete genomehypothetical protein7e-28125
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit4e-27122
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit4e-27122
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)5e-26119
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit3e-26119
NC_006513:1547092:1555046155504615563201275Azoarcus sp. EbN1, complete genomerestriction modification system specificity subunit7e-24111
NC_014219:192555:2130542130542142891236Bacillus selenitireducens MLS10 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-24111
NC_016023:267581:2798362798362811191284Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-23108
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit4e-22106
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit1e-21104
NC_011830:4187362:4191475419147541926951221Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein6e-2099
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain1e-1998.2
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein2e-1997.1
NC_008054:899441:9123779123779135401164Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit5e-1995.9
NC_010645:369408:3960523960523972901239Bordetella avium 197N, complete genomerestriction modification system, specificity subunit2e-1893.6
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein6e-1892
NC_016589:183432:2040932040932054061314Burkholderia sp. YI23 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein9e-1788.2
NC_005139:796546:8174068174068187071302Vibrio vulnificus YJ016 chromosome I, complete sequencerestriction endonuclease S subunit1e-1481.3
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain8e-1478.6
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain4e-1376.3
NC_008786:3915000:392474739247473925637891Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain2e-1274.3
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS2e-1274.3
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-1274.3
NC_018528:1932000:196291319629131963773861Lactobacillus helveticus R0052 chromosome, complete genometype I restriction endonuclease S subunit2e-1273.9
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit1e-1171.6
NC_014217:2760898:2772811277281127739891179Starkeya novella DSM 506 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1170.5
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1066.2
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_14e-1066.2
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-1065.9
NC_020164:89214:1079251079251090911167Staphylococcus warneri SG1, complete genometype I restriction modification subunit5e-1065.9
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system8e-1065.5
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein8e-0962
NC_006448:1451729:147383914738391474144306Streptococcus thermophilus LMG 18311, complete genometype I restriction-modification system specificty subunit, truncated2e-0860.8
NC_014414:1104386:1119888111988811210871200Parvularcula bermudensis HTCC2503 chromosome, complete genometype I restriction-modification system specificity subunit2e-0860.8
NC_016803:2431672:2450504245050424517211218Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0859.3
NC_015052:1771976:178810617881061788549444Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein6e-0858.9
NC_018607:1505908:1518405151840515196521248Brachyspira pilosicoli B2904 chromosome, complete genometype I restriction-modification enzyme S subunit1e-0758.2
NC_020302:744956:759284759284759622339Corynebacterium halotolerans YIM 70093 = DSM 44683, completetype IC specificity subunit4e-0756.2
NC_007406:3354000:337556333755633376264702Nitrobacter winogradskyi Nb-255, complete genomehypothetical protein5e-0755.8
NC_016641:2618587:262293726229372623101165Paenibacillus terrae HPL-003 chromosome, complete genomeSau1hsdS16e-0755.5
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S1e-0654.7
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system2e-0653.9